Searched refs:WORKING_DIR (Results 1 – 25 of 221) sorted by relevance
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7 WORKING_DIR=/home/travis/build/broadinstitute24 cd $WORKING_DIR/gatk35 cd $WORKING_DIR/gatk/scripts/38 cat $WORKING_DIR/test_m2_wdl_multi_mod.json41 cat $WORKING_DIR/test_mitochondria_m2_wdl_mod.json45 sed -r "s/\"pair_list/\"pair_list_tumor_only/g" $WORKING_DIR/test_m2_wdl_multi_mod.json >$WORKING_D…46 cd $WORKING_DIR/49 ln -fs $WORKING_DIR/gatk/scripts/mutect2_wdl/mutect2.wdl50 …OMWELL_JAR run $WORKING_DIR/gatk/scripts/mutect2_wdl/mutect2_multi_sample.wdl -i $WORKING_DIR/test…53 …MWELL_JAR run $WORKING_DIR/gatk/scripts/mutect2_wdl/mutect2_multi_sample.wdl -i $WORKING_DIR/test_…[all …]
57 WORKING_DIR=.59 WORKING_DIR=$WORKINGDIR68 …'shell':'cd $WORKING_DIR; rm -rf /dev/shm/rocksdb && mkdir /dev/shm/rocksdb && (chmod +t /dev/shm …205 … 'shell':'cd $WORKING_DIR; make $PARALLEL_j release || $CONTRUN_NAME=release $TASK_CREATION_TOOL',247 …'shell':'cd $WORKING_DIR; $GCC_481 make $PARALLEL_j release || $CONTRUN_NAME=release_gcc481 $TASK_…289 …'shell':'cd $WORKING_DIR; $CLANG make $PARALLEL_j release|| $CONTRUN_NAME=clang_release $TASK_CREA…352 …'shell':'cd $WORKING_DIR; $SHM $DEBUG V=1 make J=1 unity_test || $CONTRUN_NAME=unity_test $TASK_CR…373 …'shell':'cd $WORKING_DIR; $SKIP_FORMAT_CHECKS make J=1 LITE=1 all check || $CONTRUN_NAME=lite $TAS…395 …'shell':'cd $WORKING_DIR; $SHM $DEBUG $NON_TSAN_CRASH make J=1 db_stress || $CONTRUN_NAME=db_stres…1106 …time bash -vx ./build_tools/regression_build_test.sh $(mktemp -d $WORKING_DIR/rocksdb.XXXX) $(mkt…[all …]
57 WORKING_DIR=.59 WORKING_DIR=$WORKINGDIR68 …'shell':'cd $WORKING_DIR; rm -rf /dev/shm/rocksdb && mkdir /dev/shm/rocksdb && (chmod +t /dev/shm …207 … 'shell':'cd $WORKING_DIR; make $PARALLEL_j release || $CONTRUN_NAME=release $TASK_CREATION_TOOL',249 …'shell':'cd $WORKING_DIR; $GCC_481 make $PARALLEL_j release || $CONTRUN_NAME=release_gcc481 $TASK_…291 …'shell':'cd $WORKING_DIR; $CLANG make $PARALLEL_j release|| $CONTRUN_NAME=clang_release $TASK_CREA…354 …'shell':'cd $WORKING_DIR; $SHM $DEBUG V=1 make J=1 unity_test || $CONTRUN_NAME=unity_test $TASK_CR…375 …'shell':'cd $WORKING_DIR; $SKIP_FORMAT_CHECKS make J=1 LITE=1 all check || $CONTRUN_NAME=lite $TAS…395 'shell':'cd $WORKING_DIR; tools/report_lite_binary_size.sh',414 …'shell':'cd $WORKING_DIR; $SHM $DEBUG $NON_TSAN_CRASH make J=1 db_stress || $CONTRUN_NAME=db_stres…[all …]
7 WORKING_DIR=/home/travis/build/broadinstitute14 cd $WORKING_DIR/gatk28 cd $WORKING_DIR/gatk/scripts/33 cat $WORKING_DIR/cnn_score_variants_travis.json34 cat $WORKING_DIR/cnn_score_variants_travis_1d.json35 cat $WORKING_DIR/cram2filtered_travis.json40 ln -fs $WORKING_DIR/gatk/scripts/cnn_variant_wdl/cnn_score_variants.wdl41 cd $WORKING_DIR/gatk/scripts/cnn_variant_wdl/42 java -jar $CROMWELL_JAR run cnn_score_variants.wdl -i $WORKING_DIR/cnn_score_variants_travis_1d.json43 java -jar $CROMWELL_JAR run cnn_score_variants.wdl -i $WORKING_DIR/cnn_score_variants_travis.json[all …]
201 WORKING_DIR="../.delete_me.$PACKAGE.temp.$$"202 echo "Creating temporary working directory: $WORKING_DIR"203 if [ -e "$WORKING_DIR" ] ; then204 rm -rf "$WORKING_DIR"206 mkdir "$WORKING_DIR"219 mkdir -p "$WORKING_DIR/$CONFIG_FILE_PATH"225 mv "${CONFIG_FILES[$J]}" "$WORKING_DIR/$CONFIG_FILE_PATH/$CONFIG_FILE_NAME"251 mkdir -p "$WORKING_DIR/$CONFIG_FILE_PATH"256 mv "$WORKING_DIR/$CONFIG_FILE_PATH/$CONFIG_FILE_NAME" "${CONFIG_FILES[$J]}"265 echo "Removing temporary working directory: $WORKING_DIR"[all …]
194 WORKING_DIR="../.delete_me.$PACKAGE.temp.$$"195 echo "Creating temporary working directory: $WORKING_DIR"196 if [ -e "$WORKING_DIR" ] ; then197 rm -rf "$WORKING_DIR"199 mkdir "$WORKING_DIR"212 mkdir -p "$WORKING_DIR/$CONFIG_FILE_PATH"218 mv "${CONFIG_FILES[$J]}" "$WORKING_DIR/$CONFIG_FILE_PATH/$CONFIG_FILE_NAME"244 mkdir -p "$WORKING_DIR/$CONFIG_FILE_PATH"249 mv "$WORKING_DIR/$CONFIG_FILE_PATH/$CONFIG_FILE_NAME" "${CONFIG_FILES[$J]}"258 echo "Removing temporary working directory: $WORKING_DIR"[all …]
46 slogkey_stdout = Path(tc_parameters.WORKING_DIR, "slogkey_stdout_master")47 slogkey_stderr = Path(tc_parameters.WORKING_DIR, "slogkey_stderr_master")49 self.master_key = Path(tc_parameters.WORKING_DIR, "master.key")58 slogkey_stdout = Path(tc_parameters.WORKING_DIR, "slogkey_stdout_derived")61 self.derived_key = Path(tc_parameters.WORKING_DIR, "derived.key")62 self.cmac = Path(tc_parameters.WORKING_DIR, "cmac")71 self.decryption_key = Path(tc_parameters.WORKING_DIR, "decryption.key")75 slogverify_stdout = Path(tc_parameters.WORKING_DIR, "slogverify_stdout")76 slogverify_stderr = Path(tc_parameters.WORKING_DIR, "slogverify_stderr")77 encrypted = Path(tc_parameters.WORKING_DIR, input_file)[all …]
31 my $WORKING_DIR = "./working_dir";219 my $test_dir = "$WORKING_DIR/$trans";352 print_msg("deleting $WORKING_DIR\n");353 system "rm -rf $WORKING_DIR\n";361 prepare_source_file($WORKING_DIR);377 system "rm -rf $WORKING_DIR/*";383 print_msg("rm -rf $WORKING_DIR\n");384 system "rm -rf $WORKING_DIR";386 print_msg("Creating $WORKING_DIR ...\n");387 mkdir $WORKING_DIR or die;[all …]
105 WORKING_DIR=/data/local/tmp/MNNv2106 adb shell mkdir -p $WORKING_DIR108 adb push build$bits/MNNV2Basic.out $WORKING_DIR109 adb push build$bits/libMNN.so $WORKING_DIR110 adb push build$bits/project/android/OpenCL/libMNN_CL.so $WORKING_DIR113 adb push $model_path $WORKING_DIR115 adb shell LD_LIBRARY_PATH=$WORKING_DIR $WORKING_DIR/MNNV2Basic.out \116 $WORKING_DIR/$model_name \
36 WORKING_DIR:=${BUILD_DIR}/${BACULA_VERSION}38 BACULA_SOURCE:=${WORKING_DIR}/bacula-${BACULA_VERSION}39 BACULA_DESTDIR:=${WORKING_DIR}/destdir43 BACULA_PMDOC:=${WORKING_DIR}/installer.pmdoc102 mkdir -p "${CURDIR}/${BACULA_DESTDIR}${WORKING_DIR}"113 ${BACULA_PMDOC}: ${BACULA_DESTDIR} ${WORKING_DIR}/resources123 ${WORKING_DIR}/resources: ${BACULA_DESTDIR}124 mkdir -p "${WORKING_DIR}/resources"132 chmod +x "${WORKING_DIR}/resources/$$xres"; \153 mkdir -p "${WORKING_DIR}"[all …]
2 Alias /ledgersmb WORKING_DIR4 <Directory WORKING_DIR>16 <Directory WORKING_DIR/users>21 <Directory WORKING_DIR/bin>26 <Directory WORKING_DIR/utils>31 <Directory WORKING_DIR/LedgerSMB>
29 echo "export WORKING_DIR=$working_dir" >> env_vars.sh48 mkdir -p ${WORKING_DIR}/tarball49 "${WORKING_DIR}/releng/source-tarball/build.bash" \50 -p "${WORKING_DIR}/.git" \54 -o "${WORKING_DIR}/tarball"60 OUTDIR=${WORKING_DIR}/bins63 -i "${WORKING_DIR}/tarball/influxdb-src-${CIRCLE_SHA1}.tar.gz" \70 OUTDIR=${WORKING_DIR}/oss-packages71 BINDIR=${WORKING_DIR}/bins74 "${WORKING_DIR}/releng/packages/build.bash" \[all …]
38 private val WORKING_DIR = conf.get("spark.deploy.zookeeper.dir", "/spark") + "/master_status"41 SparkCuratorUtil.mkdir(zk, WORKING_DIR)45 serializeIntoFile(WORKING_DIR + "/" + name, obj)49 zk.delete().forPath(WORKING_DIR + "/" + name)53 zk.getChildren.forPath(WORKING_DIR).asScala69 val fileData = zk.getData().forPath(WORKING_DIR + "/" + filename)75 zk.delete().forPath(WORKING_DIR + "/" + filename)
74 cp ${CORECLR}/bin/Product/Linux.x86.Checked ${WORKING_DIR}75 cp ${CORERT}/bin/Linux.x86.Debug/tools/ilc.dll ${WORKING_DIR}76 cp ${CORERT}/bin/Linux.x86.Debug/tools/ILCompiler.* ${WORKING_DIR}77 cp ${CORERT}/bin/Linux.x86.Debug/tools/System.CommandLine.dll ${WORKING_DIR}78 cp ${CORERT}/bin/Linux.x86.Debug/tools/Microsoft.DiaSymReader.dll ${WORKING_DIR}79 cp ${CORERT}/bin/Linux.x86.Debug/tools/jitinterface.so ${WORKING_DIR}80 cp -r ${CORERT}/bin/Linux.x86.Debug/framework ${WORKING_DIR}83 cp -r ${CORERT}/bin/Linux.armel.Debug/sdk ${WORKING_DIR}89 cp ${WORKING_DIR}/libarmelnonjit.so ${WORKING_DIR}/libclrjitilc.so92 # cp ${WORKING_DIR}/libprotojit.so ${WORKING_DIR}/libclrjitilc.so
5 set(WORKING_DIR "") variable7 set(WORKING_DIR "${ITK_SOURCE_DIR}") variable9 set(WORKING_DIR "${CMAKE_SOURCE_DIR}") variable16 WORKING_DIRECTORY ${WORKING_DIR} )