Searched refs:AMBIGUOUS_ELEMENT_ASSIGNMENT (Results 1 – 5 of 5) sorted by relevance
399 if (atomThatWillReplaceOxygen.getProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT)!=null){ in processInfixFunctionalReplacementNomenclature()400 …guousElementAtoms.addAll(atomThatWillReplaceOxygen.getProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT)); in processInfixFunctionalReplacementNomenclature()406 if (a.getProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT)!=null){ in processInfixFunctionalReplacementNomenclature()407 ambiguousElementAtoms.addAll(a.getProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT)); in processInfixFunctionalReplacementNomenclature()412 if (a.getProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT)!=null){ in processInfixFunctionalReplacementNomenclature()413 ambiguousElementAtoms.addAll(a.getProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT)); in processInfixFunctionalReplacementNomenclature()417 atom.setProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT, ambiguousElementAtoms); in processInfixFunctionalReplacementNomenclature()710 atom.setProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT, ambiguousElementAtoms); in performChalcogenFunctionalReplacement()
411 …Set<Atom> oldAmbiguousElementAssignmentAtoms = atom.getProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT); in copyAndRelabelFragment()417 oldToNewAtomMap.get(atom).setProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT, newAtoms); in copyAndRelabelFragment()659 Set<Atom> ambiguousElementAssignment = atom.getProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT); in removeAtomAndAssociatedBonds()663 … ambiguousElementAssignment.iterator().next().setProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT, null); in removeAtomAndAssociatedBonds()
52 …static final PropertyKey<Set<Atom>> AMBIGUOUS_ELEMENT_ASSIGNMENT = new PropertyKey<Set<Atom>>("amb… field in Atom
567 Set<Atom> ambiguouslyElementedAtoms = atom.getProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT); in swapElementsSuchThatThisElementIsAcidic()
1704 Set<Atom> degenerateAtoms = possibleAtom.getProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT); in determineFunctionalAtomToUse()1717 Set<Atom> degenerateAtoms = possibleAtom.getProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT); in determineFunctionalAtomToUse()1736 Set<Atom> degenerateAtoms = possibleAtom.getProperty(Atom.AMBIGUOUS_ELEMENT_ASSIGNMENT); in determineFunctionalAtomToUse()