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Searched refs:AjBool (Results 1 – 25 of 541) sorted by relevance

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/dports/biology/emboss/EMBOSS-6.6.0/ajax/core/
H A Dajstr.h221 AjBool ajCharFmtLower(char *txt);
222 AjBool ajCharFmtUpper(char *txt);
278 AjBool ajStrDelStatic(AjPStr* Pstr);
417 AjBool ajStrRandom(AjPStr *s);
418 AjBool ajStrReverse(AjPStr* Pstr);
490 AjBool ajStrSetValid(AjPStr *Pstr);
499 AjBool ajStrToBool(const AjPStr str, AjBool* Pval);
510 AjBool ajStrFromBool(AjPStr* Pstr, AjBool val);
523 AjBool ajStrFmtLower(AjPStr* Pstr);
528 AjBool ajStrFmtQuery(AjPStr* Pstr);
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H A Dajnam.h72 AjBool ajNamDatabase(const AjPStr name);
73 AjBool ajNamAliasDatabase(AjPStr *Pname);
74 AjBool ajNamServer(const AjPStr name);
84 AjBool* id, AjBool* qry, AjBool* all,
88 AjBool* id, AjBool* qry, AjBool* all,
117 AjBool* id, AjBool* qry, AjBool* all,
128 AjBool ajNamDbQuery(AjPQuery qry);
129 AjBool ajNamFileQuery(AjPQuery qry);
133 AjBool ajNamDbTest(const AjPStr dbname);
138 AjBool ajNamSvrQuery(AjPQuery qry);
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H A Dajfile.h172 AjBool End;
173 AjBool App;
252 AjBool Nobuff;
313 AjBool Created;
387 AjBool ajDiroutExists(AjPDirout thys);
390 AjBool ajDiroutOpen(AjPDirout thys);
458 AjBool ajDirnameUp(AjPStr* dir);
523 AjBool ajFileFix(AjPFile file);
524 AjBool ajFileResetEof(AjPFile thys);
526 AjBool ajFileSetEof(AjPFile thys);
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H A Dajfeatwrite.h73 AjBool ajFeatOutFormatDefault(AjPStr* pformat);
79 AjBool ajFeattableWriteDebug(AjPFeattabOut ftout,
83 AjBool ajFeattableWriteBed(AjPFeattabOut ftout,
87 AjBool ajFeattableWriteDdbj(AjPFeattabOut ftout,
89 AjBool ajFeattableWriteDraw(AjPFeattabOut ftout,
91 AjBool ajFeattableWriteEmbl(AjPFeattabOut ftout,
99 AjBool ajFeattableWriteGff2(AjPFeattabOut ftout,
101 AjBool ajFeattableWriteGff3(AjPFeattabOut ftout,
103 AjBool ajFeattableWritePir(AjPFeattabOut ftout,
105 AjBool ajFeattableWriteSwiss(AjPFeattabOut ftout,
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H A Dajquery.h78 AjBool ajQuerystrParseListfile(AjPStr *Pqry);
79 AjBool ajQuerystrParseRange(AjPStr *Pqry,
81 AjBool ajQuerystrParseRead(AjPStr *Pqry,
85 AjBool *Pnontext);
93 AjBool ajQueryAddFieldAndS(AjPQuery qry, const AjPStr field,
101 AjBool ajQueryAddFieldEorS(AjPQuery qry, const AjPStr field,
105 AjBool ajQueryAddFieldNotS(AjPQuery qry, const AjPStr field,
109 AjBool ajQueryAddFieldOrS(AjPQuery qry, const AjPStr field,
115 AjBool ajQueryGetQuery(const AjPQuery query, AjPStr* Pdest);
116 AjBool ajQueryIsSet(const AjPQuery thys);
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H A Dajsql.h257 AjBool ajSqlInit(void);
316 AjBool ajSqlrowiterDone(const AjISqlrow sqli);
320 AjBool ajSqlrowiterRewind(AjISqlrow sqli);
336 AjBool ajSqlcolumnGetValue(AjPSqlrow sqlr, void **Pvalue,
339 AjBool ajSqlcolumnToStr(AjPSqlrow sqlr, AjPStr *Pvalue);
341 AjBool ajSqlcolumnToInt(AjPSqlrow sqlr, ajint *Pvalue);
353 AjBool ajSqlcolumnToBool(AjPSqlrow sqlr, AjBool *Pvalue);
357 AjBool ajSqlcolumnRewind(AjPSqlrow sqlr);
359 AjBool ajSqlcolumnNumberGetValue(const AjPSqlrow sqlr,
383 AjBool *Pvalue);
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/dports/biology/emboss/EMBOSS-6.6.0/ajax/ensembl/
H A Denstranscript.h126 const AjBool* ensTranscriptLoadCanonical(
196 AjBool ensTranscriptAddAttribute(
200 AjBool ensTranscriptAddDatabaseentry(
204 AjBool ensTranscriptAddExon(
311 AjBool ensTranscriptMapperInit(EnsPTranscript transcript, AjBool force);
385 AjBool ensTranscriptadaptorFetchAll(
413 AjBool override,
416 AjBool ensTranscriptadaptorFetchAllbyGene(
425 AjBool ensTranscriptadaptorFetchAllbySlice(
430 AjBool loadexons,
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H A Densgvvariation.h213 AjBool ensGvvariationHasFailedgvalleles(EnsPGvvariation gvv, AjBool *Presult);
215 AjBool ensGvvariationIsFailed(EnsPGvvariation gvv, AjBool *Presult);
272 AjBool primary,
291 AjBool primary,
302 AjBool ensGvvariationadaptorFetchByName(
324 AjBool ensGvvariationadaptorRetrieveFlank(
441 AjBool ensGvvariationfeatureGetSomatic(
507 AjBool somatic,
515 AjBool somatic,
621 AjBool immediate,
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H A Densgene.h77 AjBool current,
134 AjBool ensGeneSetCurrent(EnsPGene gene, AjBool current);
193 AjBool ensGeneCheckReference(const EnsPGene gene, AjBool *Presult);
234 AjBool ensGeneadaptorFetchAll(
238 AjBool ensGeneadaptorFetchAllbyBiotype(
257 AjBool override,
264 AjBool ensGeneadaptorFetchAllbySlice(
270 AjBool loadtranscripts,
293 AjBool ensGeneadaptorFetchByIdentifier(
327 AjBool ensGeneadaptorCheckReference(
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H A Densseqregion.h106 AjBool ensSeqregionAddSeqregionsynonym(EnsPSeqregion sr,
115 AjBool ensSeqregionFetchAllAttributes(EnsPSeqregion sr,
119 AjBool ensSeqregionIsLocusreferencegenomic(EnsPSeqregion sr, AjBool *Presult);
121 AjBool ensSeqregionIsNonreference(EnsPSeqregion sr, AjBool *Presult);
123 AjBool ensSeqregionIsToplevel(EnsPSeqregion sr, AjBool *Presult);
129 AjBool ensListSeqregionSortNameAscending(AjPList srs);
131 AjBool ensListSeqregionSortNameDescending(AjPList srs);
158 AjBool ensSeqregionadaptorFetchAllbyAttributecodevalue(
259 AjBool ensSeqregionsynonymadaptorFetchAllbySeqregion(
264 AjBool ensSeqregionsynonymadaptorFetchByIdentifier(
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H A Densslice.h179 AjBool ensSliceFetchAllAttributes(EnsPSlice slice,
211 AjBool ensSliceFetchSliceinverted(EnsPSlice slice,
214 AjBool ensSliceFetchSlicesub(EnsPSlice slice,
223 AjBool force,
235 AjBool ensSliceIsCircular(EnsPSlice slice, AjBool *Presult);
237 AjBool ensSliceIsNonreference(EnsPSlice slice, AjBool *Presult);
239 AjBool ensSliceIsToplevel(EnsPSlice slice, AjBool *Presult);
241 AjBool ensSliceProject(EnsPSlice slice,
246 AjBool ensSliceProjectslice(EnsPSlice srcslice,
285 AjBool duplicates,
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H A Densfeature.h249 AjBool ensFeatureMove(EnsPFeature feature,
254 AjBool ensFeatureProject(const EnsPFeature feature,
270 AjBool ensFeatureMatch(const EnsPFeature feature1,
310 AjBool (*Fstatement) (EnsPBaseadaptor ba,
317 AjBool (*Fwrite) (const void *value),
337 AjBool ensFeatureadaptorGetStartequalsend(
448 AjBool ensFeaturepairSetEvalue(EnsPFeaturepair fp,
463 AjBool ensFeaturepairSetScore(EnsPFeaturepair fp,
563 AjBool ensAssemblyexceptionfeatureSetAdaptor(
574 AjBool ensAssemblyexceptionfeatureSetIdentifier(
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H A Densanalysis.h87 AjBool displayable);
131 AjBool ensAnalysisSetAdaptor(EnsPAnalysis analysis,
147 AjBool displayable);
161 AjBool ensAnalysisSetGffsource(EnsPAnalysis analysis,
170 AjBool ensAnalysisSetName(EnsPAnalysis analysis,
185 AjBool ensAnalysisSetWebdata(EnsPAnalysis analysis,
194 AjBool ensAnalysisMatch(const EnsPAnalysis analysis1,
223 AjBool ensAnalysisadaptorFetchAll(
227 AjBool ensAnalysisadaptorFetchAllbyFeatureclass(
232 AjBool ensAnalysisadaptorFetchByIdentifier(
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H A Densoperon.h135 AjBool ensOperonAddAttribute(EnsPOperon operon,
138 AjBool ensOperonAddDatabaseentry(EnsPOperon operon,
172 AjBool ensOperonadaptorFetchAll(
176 AjBool ensOperonadaptorFetchByDisplaylabel(
181 AjBool ensOperonadaptorFetchByStableidentifier(
187 AjBool ensOperonadaptorRetrieveAllIdentifiers(
280 AjBool ensOperontranscriptFetchAllAttributes(
285 AjBool ensOperontranscriptFetchAllDatabaseentries(
291 AjBool ensOperontranscriptFetchOperon(
314 AjBool ensOperontranscriptadaptorFetchAll(
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H A Densdatabaseentry.h426 AjBool ensDatabaseentryFetchAllDependents(
448 AjBool ensDatabaseentryFetchAllMasters(
452 AjBool ensDatabaseentryFetchAllMastersByGene(
498 AjBool ensDatabaseentryadaptorFetchAllMasters(
527 AjBool ensDatabaseentryadaptorFetchAllbyGene(
534 AjBool ensDatabaseentryadaptorFetchAllbyName(
540 AjBool ensDatabaseentryadaptorFetchAllbyObject(
548 AjBool ensDatabaseentryadaptorFetchAllbySource(
587 AjBool override,
599 AjBool override,
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H A Densassemblymapper.h221 AjBool ensToplevelassemblymapperSetAdaptor(
250 AjBool ensAssemblymapperTrace(
254 AjBool ensAssemblymapperMapSeqregion(
260 AjBool fastmap,
263 AjBool ensAssemblymapperMapSlice(
266 AjBool fastmap,
269 AjBool ensAssemblymapperMapToSeqregion(
276 AjBool fastmap,
279 AjBool ensAssemblymapperMapToSlice(
283 AjBool fastmap,
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H A Densexon.h144 AjBool current,
145 AjBool constitutive,
157 AjBool ensExonGetConstitutive(const EnsPExon exon);
159 AjBool ensExonGetCurrent(const EnsPExon exon);
181 AjBool ensExonSetConstitutive(EnsPExon exon, AjBool constitutive);
183 AjBool ensExonSetCurrent(EnsPExon exon, AjBool current);
257 AjBool ensListExonSortEndAscending(AjPList exons);
259 AjBool ensListExonSortEndDescending(AjPList exons);
263 AjBool ensListExonSortStartAscending(AjPList exons);
267 AjBool ensSequenceAddFeatureExon(AjPSeq seq,
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H A Densqcalignment.h186 AjBool ensQcalignmentSetAdaptor(EnsPQcalignment qca,
189 AjBool ensQcalignmentSetAnalysis(EnsPQcalignment qca,
192 AjBool ensQcalignmentSetCoverage(EnsPQcalignment qca,
213 AjBool ensQcalignmentSetScore(EnsPQcalignment qca,
231 AjBool ensQcalignmentSetVulgar(EnsPQcalignment qca,
238 AjBool ensQcalignmentCalculateQueryCoordinates(
245 AjBool ensQcalignmentCalculateQueryCoverageDnaDna(
285 AjBool internalquery,
286 AjBool internaltarget);
332 AjBool ensQcalignmentadaptorFetchByIdentifier(
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H A Denstranslation.h131 AjBool ensTranslationSetStart(EnsPTranslation translation,
134 AjBool ensTranslationSetEnd(EnsPTranslation translation,
219 AjBool ensTranslationadaptorFetchAllbyExternalname(
223 AjBool override,
226 AjBool ensTranslationadaptorFetchAllbyIdentifiers(
230 AjBool ensTranslationadaptorFetchAllbyTranscript(
234 AjBool ensTranslationadaptorFetchByIdentifier(
239 AjBool ensTranslationadaptorFetchByStableidentifier(
248 AjBool ensTranslationadaptorFetchAllbyTranscriptsList(
252 AjBool ensTranslationadaptorFetchAllbyTranscriptsTable(
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H A Densregistry.h77 AjBool ensRegistryRetrieveAllSpecies(AjPList species);
83 AjBool ensRegistryAliasClear(void);
88 AjBool ensRegistryAliasLoadFile(const AjPStr filename);
90 AjBool ensRegistryAliasRemove(const AjPStr alias);
94 AjBool ensRegistryAliasTrace(ajuint level);
98 AjBool ensRegistryEntryClear(void);
100 AjBool ensRegistryEntryTrace(ajuint level);
104 AjBool ensRegistryIdentifierClear(void);
114 AjBool ensRegistrySourceTrace(ajuint level);
131 AjBool multi,
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H A Densgvpopulation.h123 AjBool ensGvpopulationadaptorFetchAllHapmap(
127 AjBool ensGvpopulationadaptorFetchAllLd(
131 AjBool ensGvpopulationadaptorFetchAllTagged(
136 AjBool ensGvpopulationadaptorFetchAllTags(
185 AjBool ensGvpopulationadaptorFetchByName(
190 AjBool ensGvpopulationadaptorFetchDefaultld(
230 AjBool ensGvpopulationgenotypeSetAdaptor(
234 AjBool ensGvpopulationgenotypeSetCounter(
238 AjBool ensGvpopulationgenotypeSetFrequency(
242 AjBool ensGvpopulationgenotypeSetGvgenotype(
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H A Densmarker.h325 AjBool ensMarkersynonymadaptorFetchByIdentifier(
431 AjBool ensMarkerSetAdaptor(EnsPMarker marker,
434 AjBool ensMarkerSetDisplaysynonym(EnsPMarker marker,
443 AjBool ensMarkerSetIdentifier(EnsPMarker marker,
446 AjBool ensMarkerSetPrimerLeft(EnsPMarker marker,
449 AjBool ensMarkerSetPrimerRight(EnsPMarker marker,
452 AjBool ensMarkerSetPriority(EnsPMarker marker,
455 AjBool ensMarkerSetType(EnsPMarker marker,
465 AjBool ensMarkerAddMarkersynonym(EnsPMarker marker,
573 AjBool ensMarkerfeatureadaptorFetchAllbyMarker(
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/dports/biology/emboss/EMBOSS-6.6.0/ajax/ajaxdb/
H A Dajmart.h263 AjBool Hcount;
264 AjBool Hheader;
265 AjBool Hstamp;
266 AjBool Hunique;
269 AjBool Verify;
362 AjBool ajMartGetRegistry(AjPSeqin seqin);
366 AjBool ajMartdatasetParse(AjPSeqin seqin);
376 AjBool ajMartfiltersParse(AjPSeqin seqin);
383 AjBool ajMartAssociate(AjPSeqin seqin);
392 AjBool ajMartSendQuery(AjPSeqin seqin);
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/dports/biology/emboss/EMBOSS-6.6.0/nucleus/
H A Dembpat.h185 AjBool left, AjBool right,
211 AjBool *amino, AjBool *carboxyl,
212 AjBool *fclass, AjBool *ajcompl,
213 AjBool *dontcare, AjBool *range,
227 AjBool left, AjBool right,
270 AjBool left, AjBool right);
272 AjBool left, AjBool right);
284 AjBool start, AjBool end);
298 AjBool blunt, AjBool sticky,
299 AjBool commercial, AjBool methyl,
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H A Dembshow.h121 AjBool nucleic;
128 AjBool html;
201 AjBool number;
225 AjBool dummy;
243 AjBool dummy;
261 AjBool dummy;
294 AjBool number;
343 AjBool flat;
432 AjBool threeletter, AjBool number,
435 AjBool firstorf, AjBool lastorf, AjBool showframe);
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