| /dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/interfaces/align/ |
| H A D | bam.h | 60 typedef struct BAMFileSlice BAMFileSlice; typedef
716 ALIGN_EXTERN rc_t CC BAMFileMakeSlice(const BAMFile *self, BAMFileSlice **rslt, uint32_t refSeqId, …
733 ALIGN_EXTERN rc_t CC BAMFileReadSlice(const BAMFile *self, const BAMAlignment **rslt, BAMFileSlice …
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| /dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/interfaces/align/ |
| H A D | bam.h | 60 typedef struct BAMFileSlice BAMFileSlice; typedef
716 ALIGN_EXTERN rc_t CC BAMFileMakeSlice(const BAMFile *self, BAMFileSlice **rslt, uint32_t refSeqId, …
733 ALIGN_EXTERN rc_t CC BAMFileReadSlice(const BAMFile *self, const BAMAlignment **rslt, BAMFileSlice …
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| /dports/biology/sra-tools/sra-tools-2.11.0/ngs/ngs-bam/ |
| H A D | bam.hpp | 496 class BAMFileSlice : public BAMRecordSource { class
514 …BAMFileSlice(BAMFile &p, unsigned const r, unsigned const s, unsigned const e, BAMFilePosTypeList … in BAMFileSlice() function in BAMFileSlice
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| H A D | bam.cpp | 711 return new BAMFileSlice(*this, refID, start, last, index); in Slice()
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| /dports/biology/ncbi-vdb/ngs-2.11.0/ngs-bam/ |
| H A D | bam.hpp | 496 class BAMFileSlice : public BAMRecordSource { class
514 …BAMFileSlice(BAMFile &p, unsigned const r, unsigned const s, unsigned const e, BAMFilePosTypeList … in BAMFileSlice() function in BAMFileSlice
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| H A D | bam.cpp | 711 return new BAMFileSlice(*this, refID, start, last, index); in Slice()
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| /dports/biology/ngs-sdk/ngs-2.11.1/ngs-bam/ |
| H A D | bam.hpp | 496 class BAMFileSlice : public BAMRecordSource { class
514 …BAMFileSlice(BAMFile &p, unsigned const r, unsigned const s, unsigned const e, BAMFilePosTypeList … in BAMFileSlice() function in BAMFileSlice
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| H A D | bam.cpp | 711 return new BAMFileSlice(*this, refID, start, last, index); in Slice()
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| /dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/libs/align/ |
| H A D | align-access.c | 308 BAMFileSlice *slice;
356 BAMFileSlice *slice; in AlignAccessDBWindowedAlignments()
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| H A D | bam.c | 4201 struct BAMFileSlice { struct
4259 static void copyRanges(BAMFileSlice *slice, in copyRanges()
4320 static BAMFileSlice *makeSlice(BAMFile const *const self, in makeSlice()
4332 BAMFileSlice *slice; in makeSlice()
4358 LIB_EXPORT rc_t CC BAMFileMakeSlice(const BAMFile *self, BAMFileSlice **rslt, uint32_t refSeqId, ui… in BAMFileMakeSlice()
4376 LIB_EXPORT rc_t CC BAMFileReadSlice(const BAMFile *cself, const BAMAlignment **rhs, BAMFileSlice *s… in BAMFileReadSlice()
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| /dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/libs/align/ |
| H A D | align-access.c | 308 BAMFileSlice *slice;
356 BAMFileSlice *slice; in AlignAccessDBWindowedAlignments()
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| H A D | bam.c | 4201 struct BAMFileSlice { struct
4259 static void copyRanges(BAMFileSlice *slice, in copyRanges()
4320 static BAMFileSlice *makeSlice(BAMFile const *const self, in makeSlice()
4332 BAMFileSlice *slice; in makeSlice()
4358 LIB_EXPORT rc_t CC BAMFileMakeSlice(const BAMFile *self, BAMFileSlice **rslt, uint32_t refSeqId, ui… in BAMFileMakeSlice()
4376 LIB_EXPORT rc_t CC BAMFileReadSlice(const BAMFile *cself, const BAMAlignment **rhs, BAMFileSlice *s… in BAMFileReadSlice()
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