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Searched refs:BEGINR_NODE (Results 1 – 8 of 8) sorted by relevance

/dports/biology/tRNAscan-SE/tRNAscan-SE-2.0/src/
H A Dmaxmodelmaker.c300 mmx[j][i].begr_ftype = (char) BEGINR_NODE; in alloc_maxmx()
409 mmx[j][j].sc[BEGINR_NODE] = mmx[j][j].sc[MATL_NODE] + in init_maxmx()
675 mmx[j][i2].sc[MATL_NODE] < mmx[j][i].sc[BEGINR_NODE] && in recurse_maxmx()
676 mmx[j][i2].sc[MATR_NODE] < mmx[j][i].sc[BEGINR_NODE] && in recurse_maxmx()
677 mmx[j][i2].sc[BIFURC_NODE] < mmx[j][i].sc[BEGINR_NODE]) in recurse_maxmx()
703 if (sc > mmx[j][i].sc[BEGINR_NODE]) in recurse_maxmx()
705 mmx[j][i].sc[BEGINR_NODE] = sc; in recurse_maxmx()
901 0, BEGINR_NODE)); in trace_maxmx()
915 case BEGINR_NODE: in trace_maxmx()
1825 case BEGINR_NODE: in print_assignments()
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H A Dmodel.c225 case BEGINR_NODE: in RearrangeCM()
263 case BEGINR_NODE: in RearrangeCM()
307 if (cm->nd[k].type == BEGINR_NODE) in RearrangeCM()
536 case BEGINR_NODE: tflags = uBEGIN_ST; break; in MakePCM()
571 case BEGINR_NODE: in MakePCM()
609 if (cm->nd[k].type == BEGINR_NODE) in MakePCM()
H A Dmodelmaking.c215 case BEGINR_NODE: in Transmogrify()
399 else if (cur->type == BEGINR_NODE) /* INSL */ in EasyModelmaker()
434 PushTracestack(dolist, AttachTrace(cur, NULL, ct[i]+1, j, -1, BEGINR_NODE)); in EasyModelmaker()
H A Dstructs.h34 #define BEGINR_NODE 5 macro
H A Ddebug.c72 case BEGINR_NODE: return "BEGINR_NODE"; in NodetypeName()
H A Dprobify.c99 case BEGINR_NODE: in ProbifyCM()
H A Dstructs.c76 case BEGINR_NODE: return uBEGIN_ST; in UniqueStatetype()
H A Dfastmodelmaker.c501 branch = AttachTrace(curr_ztr, NULL, mid+1, j, -1, BEGINR_NODE); in ztrace()