Searched refs:BEGIN_ST (Results 1 – 4 of 4) sorted by relevance
/dports/biology/tRNAscan-SE/tRNAscan-SE-2.0/src/ |
H A D | maxmodelmaker.c | 388 trans[BEGIN_ST][MATL_ST] = (double) nseq - gapcount[j]; in init_maxmx() 389 trans[BEGIN_ST][DEL_ST] = gapcount[j]; in init_maxmx() 394 (log(trans[BEGIN_ST][DEL_ST]) * gapcount[j])) in init_maxmx() 403 trans[BEGIN_ST][DEL_ST] = gapcount[j]; in init_maxmx() 404 trans[BEGIN_ST][MATL_ST] = (double) nseq - gapcount[j]; in init_maxmx() 412 (log(trans[BEGIN_ST][DEL_ST]) * gapcount[j])) in init_maxmx() 1421 fy = BEGIN_ST; in frombeginr_transtable() 1480 fy = BEGIN_ST; in frombeginl_transtable() 1540 trans[BEGIN_ST][ty] += weights[idx]; in fromroot_transtable() 1544 trans[BEGIN_ST][INSL_ST] += weights[idx]; in fromroot_transtable() [all …]
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H A D | smallviterbi.c | 643 curr_tr = AttachTrace(tr, NULL, 0, N-1, 0, BEGIN_ST); in trace_mx() 685 PushTracestack(dolist, AttachTrace(curr_tr, NULL, i2-1, j2-1, icm[end_y].tmx[1], BEGIN_ST)); in trace_mx() 686 PushTracestack(dolist, AttachTrace(curr_tr, NULL, i2-1, j2-1, icm[end_y].tmx[0], BEGIN_ST)); in trace_mx() 701 icm[end_y].tmx[1], BEGIN_ST)); in trace_mx() 703 icm[end_y].tmx[0], BEGIN_ST)); in trace_mx()
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H A D | structs.h | 54 #define BEGIN_ST DEL_ST macro
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H A D | structs.c | 45 case uBEGIN_ST: return BEGIN_ST; in StatetypeIndex()
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