Searched refs:BlastKarlinGetMatrixValues (Results 1 – 7 of 7) sorted by relevance
| /dports/biology/ncbi-toolkit/ncbi/network/wwwblast/Src/ |
| H A D | wblast2.c | 600 BlastKarlinGetMatrixValues("PAM30", in Blast2SeqMainPage()
604 BlastKarlinGetMatrixValues("MY_PAM70", in Blast2SeqMainPage()
608 BlastKarlinGetMatrixValues("MY_BLOSUM80", in Blast2SeqMainPage()
612 BlastKarlinGetMatrixValues("MY_BLOSUM45", in Blast2SeqMainPage()
617 BlastKarlinGetMatrixValues("MY_BLOSUM62", in Blast2SeqMainPage()
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| /dports/biology/ncbi-toolkit/ncbi/tools/ |
| H A D | blastkar.h | 628 Int2 LIBCALL BlastKarlinGetMatrixValues PROTO((CharPtr matrix, Int4Ptr PNTR open, Int4Ptr PNTR exte…
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| H A D | impatool.c | 399 int num_lambdas = BlastKarlinGetMatrixValues(matrixName, NULL, NULL, in IMPALAfindUngappedLambda()
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| H A D | blastkar.c | 3268 BlastKarlinGetMatrixValues(CharPtr matrix, Int4Ptr PNTR open, Int4Ptr PNTR extension, FloatHiPtr PN… in BlastKarlinGetMatrixValues() function
3442 …n = BlastKarlinGetMatrixValues(matrix, &gapOpen_arr, &gapExtend_arr, &Lambda_arr, &Kappa_arr, &H_a… in BlastKarlinGetDefaultMatrixValues()
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| H A D | blast.c | 5058 Int4 array_size = BlastKarlinGetMatrixValues(search->sbp->name, in BLASTSetUpSearchInternalByLoc()
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| /dports/biology/ncbi-toolkit/ncbi/biostruc/cdd/ |
| H A D | cddutil.c | 2429 array_size = BlastKarlinGetMatrixValues(sbp->name,&open,&extend,&lambda,&K,&H,NULL); in CddDenDiagCposComputation()
2629 array_size = BlastKarlinGetMatrixValues(sbp->name,&open,&extend,&lambda,&K,&H,NULL); in CddCposComputation()
4315 array_size = BlastKarlinGetMatrixValues(sbp->name,&open,&extend,&lambda,&K,&H,NULL); in CddCposCompPart1()
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| H A D | cddposutil.c | 1706 array_size = BlastKarlinGetMatrixValues(search->sbp->name, &open, &extend, &lambda, &K, &H, NULL); in CddSetUpSearchInternalByLoc()
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