| /dports/biology/vt/vt-0.57721/lib/htslib/htslib/ |
| H A D | synced_bcf_reader.h | 82 #define COLLAPSE_SOME 8 // at least some of the ALTs must match macro
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| /dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/htslib/ |
| H A D | synced_bcf_reader.h | 82 #define COLLAPSE_SOME 8 // at least some of the ALTs must match macro
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| /dports/biology/stacks/stacks-2.4/htslib/htslib/ |
| H A D | synced_bcf_reader.h | 82 #define COLLAPSE_SOME 8 // at least some of the ALTs must match macro
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| /dports/biology/kallisto/kallisto-0.46.1/ext/htslib/htslib/ |
| H A D | synced_bcf_reader.h | 82 #define COLLAPSE_SOME 8 // at least some of the ALTs must match macro
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| /dports/biology/py-pysam/pysam-0.18.0/htslib/htslib/ |
| H A D | synced_bcf_reader.h | 82 #define COLLAPSE_SOME 8 // at least some of the ALTs must match macro
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| /dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/htslib/ |
| H A D | synced_bcf_reader.h | 82 #define COLLAPSE_SOME 8 // at least some of the ALTs must match macro
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| /dports/biology/htslib/htslib-1.14/htslib/ |
| H A D | synced_bcf_reader.h | 82 #define COLLAPSE_SOME 8 // at least some of the ALTs must match macro
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| /dports/biology/bio-mocha/bcftools-1.14/ |
| H A D | vcfplugin.c | 770 args->files->collapse |= COLLAPSE_SOME; in main_plugin()
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| H A D | vcfisec.c | 569 else if ( !strcmp(optarg,"some") ) args->files->collapse |= COLLAPSE_SOME; in main_vcfisec()
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| H A D | vcfstats.c | 1829 else if ( !strcmp(optarg,"some") ) args->files->collapse |= COLLAPSE_SOME; in main_vcfstats()
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| H A D | vcfannotate.c | 3328 else if ( !strcmp(optarg,"some") ) collapse |= COLLAPSE_SOME; in main_vcfannotate()
3372 args->files->collapse = collapse ? collapse : COLLAPSE_SOME; in main_vcfannotate()
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| /dports/biology/bcftools/bcftools-1.14/ |
| H A D | vcfplugin.c | 770 args->files->collapse |= COLLAPSE_SOME; in main_plugin()
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| H A D | vcfisec.c | 569 else if ( !strcmp(optarg,"some") ) args->files->collapse |= COLLAPSE_SOME; in main_vcfisec()
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| H A D | vcfstats.c | 1829 else if ( !strcmp(optarg,"some") ) args->files->collapse |= COLLAPSE_SOME; in main_vcfstats()
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| H A D | vcfannotate.c | 3328 else if ( !strcmp(optarg,"some") ) collapse |= COLLAPSE_SOME; in main_vcfannotate()
3372 args->files->collapse = collapse ? collapse : COLLAPSE_SOME; in main_vcfannotate()
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| /dports/biology/py-pysam/pysam-0.18.0/bcftools/ |
| H A D | vcfplugin.c | 770 args->files->collapse |= COLLAPSE_SOME; in main_plugin()
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| H A D | vcfplugin.c.pysam.c | 772 args->files->collapse |= COLLAPSE_SOME; in main_plugin()
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| H A D | vcfisec.c | 569 else if ( !strcmp(optarg,"some") ) args->files->collapse |= COLLAPSE_SOME; in main_vcfisec()
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| H A D | vcfisec.c.pysam.c | 571 else if ( !strcmp(optarg,"some") ) args->files->collapse |= COLLAPSE_SOME; in main_vcfisec()
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| H A D | vcfstats.c | 1829 else if ( !strcmp(optarg,"some") ) args->files->collapse |= COLLAPSE_SOME; in main_vcfstats()
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| H A D | vcfannotate.c | 3328 else if ( !strcmp(optarg,"some") ) collapse |= COLLAPSE_SOME; in main_vcfannotate()
3372 args->files->collapse = collapse ? collapse : COLLAPSE_SOME; in main_vcfannotate()
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| H A D | vcfannotate.c.pysam.c | 3330 else if ( !strcmp(optarg,"some") ) collapse |= COLLAPSE_SOME; in main_vcfannotate()
3374 args->files->collapse = collapse ? collapse : COLLAPSE_SOME; in main_vcfannotate()
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| H A D | vcfstats.c.pysam.c | 1831 else if ( !strcmp(optarg,"some") ) args->files->collapse |= COLLAPSE_SOME; in main_vcfstats()
|