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Searched refs:CRAM_QUAL (Results 1 – 16 of 16) sorted by relevance

/dports/biology/vt/vt-0.57721/lib/htslib/cram/
H A Dcram_structs.h810 #define CRAM_QUAL (CRAM_CIGAR | CRAM_RL | CRAM_AP | CRAM_QS | CRAM_QQ) macro
H A Dcram_decode.c734 s->data_series |= CRAM_QUAL; in cram_dependent_data_series()
/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/cram/
H A Dcram_structs.h823 #define CRAM_QUAL (CRAM_CIGAR | CRAM_RL | CRAM_AP | CRAM_QS | CRAM_QQ) macro
H A Dcram_decode.c617 s->data_series |= CRAM_QUAL; in cram_dependent_data_series()
/dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/cram/
H A Dcram_structs.h810 #define CRAM_QUAL (CRAM_CIGAR | CRAM_RL | CRAM_AP | CRAM_QS | CRAM_QQ) macro
H A Dcram_decode.c734 s->data_series |= CRAM_QUAL; in cram_dependent_data_series()
/dports/biology/stacks/stacks-2.4/htslib/cram/
H A Dcram_structs.h800 #define CRAM_QUAL (CRAM_CIGAR | CRAM_RL | CRAM_AP | CRAM_QS | CRAM_QQ) macro
H A Dcram_decode.c734 hdr->data_series |= CRAM_QUAL; in cram_dependent_data_series()
/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/cram/
H A Dcram_structs.h801 #define CRAM_QUAL (CRAM_CIGAR | CRAM_RL | CRAM_AP | CRAM_QS | CRAM_QQ) macro
H A Dcram_decode.c734 hdr->data_series |= CRAM_QUAL; in cram_dependent_data_series()
/dports/biology/py-pysam/pysam-0.18.0/htslib/cram/
H A Dcram_structs.h924 #define CRAM_QUAL (CRAM_CIGAR | CRAM_RL | CRAM_AP | CRAM_QS | CRAM_QQ) macro
H A Dcram_decode.c609 s->data_series |= CRAM_QUAL; in cram_dependent_data_series()
/dports/biology/htslib/htslib-1.14/cram/
H A Dcram_structs.h924 #define CRAM_QUAL (CRAM_CIGAR | CRAM_RL | CRAM_AP | CRAM_QS | CRAM_QQ) macro
H A Dcram_decode.c609 s->data_series |= CRAM_QUAL; in cram_dependent_data_series()
/dports/biology/iolib/io_lib-io_lib-1-14-10/io_lib/
H A Dcram_structs.h942 #define CRAM_QUAL (CRAM_CIGAR | CRAM_RL | CRAM_AP | CRAM_QS | CRAM_QQ) macro
H A Dcram_decode.c695 s->data_series |= CRAM_QUAL; in cram_dependent_data_series()