| /dports/biology/emboss/EMBOSS-6.6.0/ajax/ensembl/ |
| H A D | ensgvattribute.c | 1151 if (gvaa->CacheByIdentifier) in gvattributeadaptorCacheInit()
1155 gvaa->CacheByIdentifier = ajTableuintNew(0U); in gvattributeadaptorCacheInit()
1158 gvaa->CacheByIdentifier, in gvattributeadaptorCacheInit()
1218 if (!gvaa->CacheByIdentifier) in gvattributeadaptorCacheInsert()
1230 gvaa->CacheByIdentifier, in gvattributeadaptorCacheInsert()
1241 ajTablePut(gvaa->CacheByIdentifier, in gvattributeadaptorCacheInsert()
1291 gvaa->CacheByIdentifier, in gvattributeadaptorCacheRemove()
1323 ajTableDel(&gvaa->CacheByIdentifier); in ensGvattributeadaptorCacheClear()
1561 if (!gvaa->CacheByIdentifier) in ensGvattributeadaptorFetchAllbyCode()
1564 ajTableToarrayValues(gvaa->CacheByIdentifier, &valarray); in ensGvattributeadaptorFetchAllbyCode()
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| H A D | ensgvsource.c | 1636 if (!gvsa->CacheByIdentifier) in gvsourceadaptorCacheInsert()
1651 gvsa->CacheByIdentifier, in gvsourceadaptorCacheInsert()
1666 ajTablePut(gvsa->CacheByIdentifier, in gvsourceadaptorCacheInsert()
1740 gvsa->CacheByIdentifier, in gvsourceadaptorCacheRemove()
1805 if (gvsa->CacheByIdentifier) in gvsourceadaptorCacheInit()
1812 gvsa->CacheByIdentifier, in gvsourceadaptorCacheInit()
2033 ajTableDel(&pthis->CacheByIdentifier); in ensGvsourceadaptorDel()
2238 if (!gvsa->CacheByIdentifier) in ensGvsourceadaptorFetchAll()
2241 ajTableMap(gvsa->CacheByIdentifier, in ensGvsourceadaptorFetchAll()
2289 if (!gvsa->CacheByIdentifier) in ensGvsourceadaptorFetchAllbyGvsourceType()
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| H A D | ensattribute.c | 2264 if (ata->CacheByIdentifier) in attributetypeadaptorCacheInit()
2271 ata->CacheByIdentifier, in attributetypeadaptorCacheInit()
2340 if (!ata->CacheByIdentifier) in attributetypeadaptorCacheInsert()
2355 ata->CacheByIdentifier, in attributetypeadaptorCacheInsert()
2372 ajTablePut(ata->CacheByIdentifier, in attributetypeadaptorCacheInsert()
2448 ata->CacheByIdentifier, in attributetypeadaptorCacheRemove()
2498 ajTableDel(&ata->CacheByIdentifier); in ensAttributetypeadaptorCacheClear()
2565 ajTableDel(&pthis->CacheByIdentifier); in ensAttributetypeadaptorDel()
2746 if (!ata->CacheByIdentifier) in ensAttributetypeadaptorFetchAll()
2749 ajTableMap(ata->CacheByIdentifier, in ensAttributetypeadaptorFetchAll()
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| H A D | ensexternaldatabase.c | 1791 if (!edba->CacheByIdentifier) in externaldatabaseadaptorCacheInsert()
1806 edba->CacheByIdentifier, in externaldatabaseadaptorCacheInsert()
1840 ajTablePut(edba->CacheByIdentifier, in externaldatabaseadaptorCacheInsert()
1932 edba->CacheByIdentifier, in externaldatabaseadaptorCacheRemove()
2053 if (edba->CacheByIdentifier) in externaldatabaseadaptorCacheInit()
2060 edba->CacheByIdentifier, in externaldatabaseadaptorCacheInit()
2223 ajTableDel(&pthis->CacheByIdentifier); in ensExternaldatabaseadaptorDel()
2415 if (!edba->CacheByIdentifier) in ensExternaldatabaseadaptorFetchAll()
2418 ajTableMap(edba->CacheByIdentifier, in ensExternaldatabaseadaptorFetchAll()
2477 if (!edba->CacheByIdentifier) in ensExternaldatabaseadaptorFetchByIdentifier()
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| H A D | ensdensity.c | 1326 if (!dta->CacheByIdentifier) in densitytypeadaptorCacheInsert()
1338 dta->CacheByIdentifier, in densitytypeadaptorCacheInsert()
1361 ajTablePut(dta->CacheByIdentifier, in densitytypeadaptorCacheInsert()
1401 if (dta->CacheByIdentifier) in densitytypeadaptorCacheInit()
1405 dta->CacheByIdentifier = ajTableuintNew(0U); in densitytypeadaptorCacheInit()
1408 dta->CacheByIdentifier, in densitytypeadaptorCacheInit()
1579 ajTableDel(&pthis->CacheByIdentifier); in ensDensitytypeadaptorDel()
1755 if (!dta->CacheByIdentifier) in ensDensitytypeadaptorFetchAll()
1758 ajTableMap(dta->CacheByIdentifier, in ensDensitytypeadaptorFetchAll()
1806 if (!dta->CacheByIdentifier) in ensDensitytypeadaptorFetchAllbyAnalysisname()
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| H A D | ensqcdatabase.c | 2230 if (!qcdba->CacheByIdentifier) in qcdatabaseadaptorCacheInsert()
2245 qcdba->CacheByIdentifier, in qcdatabaseadaptorCacheInsert()
2262 ajTablePut(qcdba->CacheByIdentifier, in qcdatabaseadaptorCacheInsert()
2340 qcdba->CacheByIdentifier, in qcdatabaseadaptorCacheRemove()
2396 if (qcdba->CacheByIdentifier) in qcdatabaseadaptorCacheInit()
2400 qcdba->CacheByIdentifier = ajTableuintNew(0U); in qcdatabaseadaptorCacheInit()
2403 qcdba->CacheByIdentifier, in qcdatabaseadaptorCacheInit()
2583 ajTableDel(&pthis->CacheByIdentifier); in ensQcdatabaseadaptorDel()
2747 if (!qcdba->CacheByIdentifier) in ensQcdatabaseadaptorFetchAllbyClasstype()
2822 if (!qcdba->CacheByIdentifier) in ensQcdatabaseadaptorFetchByIdentifier()
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| H A D | ensanalysis.c | 2756 if (aa->CacheByIdentifier) in analysisadaptorCacheInit()
2760 aa->CacheByIdentifier = ajTableuintNew(0); in analysisadaptorCacheInit()
2763 aa->CacheByIdentifier, in analysisadaptorCacheInit()
2835 if (!aa->CacheByIdentifier) in analysisadaptorCacheInsert()
2850 aa->CacheByIdentifier, in analysisadaptorCacheInsert()
2867 ajTablePut(aa->CacheByIdentifier, in analysisadaptorCacheInsert()
2939 aa->CacheByIdentifier, in analysisadaptorCacheRemove()
2988 ajTableDel(&aa->CacheByIdentifier); in ensAnalysisadaptorCacheClear()
3233 if (!aa->CacheByIdentifier) in ensAnalysisadaptorFetchAll()
3236 ajTableMap(aa->CacheByIdentifier, in ensAnalysisadaptorFetchAll()
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| H A D | ensdata.h | 468 EnsPCache CacheByIdentifier; member
531 EnsPCache CacheByIdentifier; member
910 AjPTable CacheByIdentifier; member
1003 AjPTable CacheByIdentifier; member
1028 AjPTable CacheByIdentifier; member
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| H A D | ensmiscellaneous.c | 1458 if (msa->CacheByIdentifier) in miscellaneoussetadaptorCacheInit()
1462 msa->CacheByIdentifier = ajTableuintNew(0U); in miscellaneoussetadaptorCacheInit()
1465 msa->CacheByIdentifier, in miscellaneoussetadaptorCacheInit()
1539 if (!msa->CacheByIdentifier) in miscellaneoussetadaptorCacheInsert()
1554 msa->CacheByIdentifier, in miscellaneoussetadaptorCacheInsert()
1571 ajTablePut(msa->CacheByIdentifier, in miscellaneoussetadaptorCacheInsert()
1646 msa->CacheByIdentifier, in miscellaneoussetadaptorCacheRemove()
1696 ajTableDel(&msa->CacheByIdentifier); in ensMiscellaneoussetadaptorCacheClear()
1947 if (!msa->CacheByIdentifier) in ensMiscellaneoussetadaptorFetchAll()
1950 ajTableMap(msa->CacheByIdentifier, in ensMiscellaneoussetadaptorFetchAll()
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| H A D | ensontology.c | 1024 if (oa->CacheByIdentifier) in ontologyadaptorCacheInit()
1031 oa->CacheByIdentifier, in ontologyadaptorCacheInit()
1104 if (!oa->CacheByIdentifier) in ontologyadaptorCacheInsert()
1119 oa->CacheByIdentifier, in ontologyadaptorCacheInsert()
1136 ajTablePut(oa->CacheByIdentifier, in ontologyadaptorCacheInsert()
1213 oa->CacheByIdentifier, in ontologyadaptorCacheRemove()
1303 ajTableDel(&pthis->CacheByIdentifier); in ensOntologyadaptorDel()
1487 if (!oa->CacheByIdentifier) in ensOntologyadaptorFetchAll()
1490 ajTableMap(oa->CacheByIdentifier, in ensOntologyadaptorFetchAll()
1535 if (!oa->CacheByIdentifier) in ensOntologyadaptorFetchAllbyName()
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| H A D | ensgvdata.h | 451 AjPTable CacheByIdentifier; member
692 AjPTable CacheByIdentifier; member
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| H A D | enscoordsystem.c | 1653 if (!csa->CacheByIdentifier) in coordsystemadaptorCacheInit()
1655 csa->CacheByIdentifier = ajTableuintNew(0U); in coordsystemadaptorCacheInit()
1657 ajTableSetDestroyvalue(csa->CacheByIdentifier, in coordsystemadaptorCacheInit()
1717 ajTablePut(csa->CacheByIdentifier, in coordsystemadaptorCacheInit()
2522 ajTableDel(&pthis->CacheByIdentifier); in ensCoordsystemadaptorDel()
2700 ajTableMap(csa->CacheByIdentifier, in ensCoordsystemadaptorFetchAll()
2811 *Pcs = (EnsPCoordsystem) ajTableFetchmodV(csa->CacheByIdentifier, in ensCoordsystemadaptorFetchByIdentifier()
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| H A D | ensmetainformation.c | 1190 temp = (EnsPMetainformation) ajTablePut(mia->CacheByIdentifier, in metainformationadaptorCacheInit()
1293 mia->CacheByIdentifier = ajTableuintNew(0U); in ensMetainformationadaptorNew()
1296 mia->CacheByIdentifier, in ensMetainformationadaptorNew()
1407 ajTableDel(&pthis->CacheByIdentifier); in ensMetainformationadaptorDel()
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| H A D | ensmetainformation.h | 70 AjPTable CacheByIdentifier; member
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| H A D | ensseqregion.c | 2112 sra->CacheByIdentifier = ensCacheNew( in ensSeqregionadaptorNew()
2199 ensCacheDel(&pthis->CacheByIdentifier); in ensSeqregionadaptorDel()
2439 ensCacheFetch(sra->CacheByIdentifier, (void *) Pid, (void **) &sr1); in ensSeqregionadaptorCacheInsert()
2459 ensCacheStore(sra->CacheByIdentifier, in ensSeqregionadaptorCacheInsert()
2575 ensCacheRemove(sra->CacheByIdentifier, (const void *) &sr->Identifier); in ensSeqregionadaptorCacheRemove()
2958 ensCacheFetch(sra->CacheByIdentifier, (void *) &identifier, (void **) Psr); in ensSeqregionadaptorFetchByIdentifier()
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| H A D | enscoordsystem.h | 94 AjPTable CacheByIdentifier; member
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| H A D | ensdensity.h | 102 AjPTable CacheByIdentifier; member
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| H A D | ensqcsequence.h | 71 AjPTable CacheByIdentifier; member
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| H A D | ensmiscellaneous.h | 84 AjPTable CacheByIdentifier; member
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| H A D | ensqcdatabase.h | 115 AjPTable CacheByIdentifier; member
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| H A D | ensontology.h | 81 AjPTable CacheByIdentifier; member
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| H A D | ensfeature.c | 8536 if (!aefa->CacheByIdentifier) in assemblyexceptionfeatureadaptorCacheInit()
8619 ajTablePut(aefa->CacheByIdentifier, in assemblyexceptionfeatureadaptorCacheInit()
8739 aefa->CacheByIdentifier = ajTableuintNew(0U); in ensAssemblyexceptionfeatureadaptorNew()
8742 aefa->CacheByIdentifier, in ensAssemblyexceptionfeatureadaptorNew()
8831 ajTableClearDelete(pthis->CacheByIdentifier); in ensAssemblyexceptionfeatureadaptorDel()
9325 aefa->CacheByIdentifier, in ensAssemblyexceptionfeatureadaptorFetchByIdentifier()
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| H A D | ensslice.c | 4652 sla->CacheByIdentifier = ensCacheNew( in ensSliceadaptorNew()
4737 ensCacheDel(&pthis->CacheByIdentifier); in ensSliceadaptorDel()
4884 ensCacheFetch(sla->CacheByIdentifier, in ensSliceadaptorCacheInsert()
4907 ensCacheStore(sla->CacheByIdentifier, in ensSliceadaptorCacheInsert()
6033 ensCacheFetch(sla->CacheByIdentifier, (void *) key, (void **) Pslice); in ensSliceadaptorFetchBySeqregionIdentifier()
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| H A D | ensfeature.h | 125 AjPTable CacheByIdentifier; member
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