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/dports/biology/subread/subread-2.0.2-source/src/
H A DreadSummary.c2696 ChroNames[*cigar_sect] = (*chro); in parse_bin()
2741 ChroNames[*cigar_sect] = (*chro); in parse_bin()
2823 strcpy(junctions_current[ret].chromosome_name_left, ChroNames[x1]); in calc_junctions_from_cigarInts()
2824 strcpy(junctions_current[ret].chromosome_name_right, ChroNames[x1]); in calc_junctions_from_cigarInts()
2847 char * ChroNames[global_context -> max_M]; in process_line_junctions() local
3198 char ** ChroNames = thread_context -> proc_ChroNames; in process_line_buffer() local
3594 if(this_chro_info == NULL && memcmp(ChroNames[cigar_section_id], "chr", 3)==0) in process_line_buffer()
3596 …this_chro_info = HashTableGet(global_context -> exontable_chro_table, ChroNames[cigar_section_id]+… in process_line_buffer()
3599 if(this_chro_info == NULL && strlen(ChroNames[cigar_section_id])<=2) in process_line_buffer()
3602 strcpy(thread_context -> chro_name_buff+3, ChroNames[cigar_section_id]); in process_line_buffer()
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