/dports/biology/ugene/ugene-40.1/src/plugins/api_tests/src/core/datatype/msa/ |
H A D | MsaRowUnitTests.h | 349 DECLARE_METATYPE(MsaRowUnitTests, createRow_noGaps) 358 DECLARE_METATYPE(MsaRowUnitTests, rowName_setName) 364 DECLARE_METATYPE(MsaRowUnitTests, simplify_gaps) 393 DECLARE_METATYPE(MsaRowUnitTests, remove_empty) 430 DECLARE_METATYPE(MsaRowUnitTests, crop_empty) 431 DECLARE_METATYPE(MsaRowUnitTests, crop_insideGap1) 432 DECLARE_METATYPE(MsaRowUnitTests, crop_insideGap2) 435 DECLARE_METATYPE(MsaRowUnitTests, crop_insideSeq1) 436 DECLARE_METATYPE(MsaRowUnitTests, crop_insideSeq2) 447 DECLARE_METATYPE(MsaRowUnitTests, crop_trailing) [all …]
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H A D | MsaUnitTests.h | 270 DECLARE_METATYPE(MsaUnitTests, clear_notEmpty); 271 DECLARE_METATYPE(MsaUnitTests, name_ctor); 272 DECLARE_METATYPE(MsaUnitTests, name_setName); 273 DECLARE_METATYPE(MsaUnitTests, alphabet_ctor); 275 DECLARE_METATYPE(MsaUnitTests, info_setGet); 278 DECLARE_METATYPE(MsaUnitTests, length_get); 282 DECLARE_METATYPE(MsaUnitTests, numOfRows_empty); 287 DECLARE_METATYPE(MsaUnitTests, trim_empty); 291 DECLARE_METATYPE(MsaUnitTests, simplify_empty); 297 DECLARE_METATYPE(MsaUnitTests, getRows_oneRow); [all …]
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/dports/biology/ugene/ugene-40.1/src/plugins/api_tests/src/core/format/sqlite_msa_dbi/ |
H A D | MsaDbiSQLiteSpecificUnitTests.h | 159 DECLARE_METATYPE(MsaDbiSQLiteSpecificUnitTests, updateMsaName_undo); 160 DECLARE_METATYPE(MsaDbiSQLiteSpecificUnitTests, updateMsaName_redo); 184 DECLARE_METATYPE(MsaDbiSQLiteSpecificUnitTests, updateRowName_undo); 185 DECLARE_METATYPE(MsaDbiSQLiteSpecificUnitTests, updateRowName_redo); 189 DECLARE_METATYPE(MsaDbiSQLiteSpecificUnitTests, addRow_append_undo); 202 DECLARE_METATYPE(MsaDbiSQLiteSpecificUnitTests, removeRow_undo); 203 DECLARE_METATYPE(MsaDbiSQLiteSpecificUnitTests, removeRow_redo); 206 DECLARE_METATYPE(MsaDbiSQLiteSpecificUnitTests, removeRows_undo); 207 DECLARE_METATYPE(MsaDbiSQLiteSpecificUnitTests, removeRows_redo); 210 DECLARE_METATYPE(MsaDbiSQLiteSpecificUnitTests, addRows_undo); [all …]
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/dports/biology/ugene/ugene-40.1/src/plugins/api_tests/src/core/datatype/udr/ |
H A D | UdrSchemaUnitTests.h | 98 DECLARE_METATYPE(UdrSchemaUnitTests, addField_RecordId); 99 DECLARE_METATYPE(UdrSchemaUnitTests, addField_Object); 100 DECLARE_METATYPE(UdrSchemaUnitTests, addField_DuplicateName); 101 DECLARE_METATYPE(UdrSchemaUnitTests, addField_IncorrectName); 103 DECLARE_METATYPE(UdrSchemaUnitTests, addField_BLOB_2_indexed); 106 DECLARE_METATYPE(UdrSchemaUnitTests, getField_Range); 107 DECLARE_METATYPE(UdrSchemaUnitTests, getField_Data); 115 DECLARE_METATYPE(UdrSchemaUnitTests, addMultiIndex_BackOrder); 117 DECLARE_METATYPE(UdrSchemaUnitTests, addMultiIndex_BLOB); 118 DECLARE_METATYPE(UdrSchemaUnitTests, UdrValue_Double_getInt); [all …]
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H A D | RawDataUdrSchemaUnitTests.h | 65 DECLARE_METATYPE(RawDataUdrSchemaUnitTests, getObject); 66 DECLARE_METATYPE(RawDataUdrSchemaUnitTests, getObject_Null); 67 DECLARE_METATYPE(RawDataUdrSchemaUnitTests, readAllContent); 68 DECLARE_METATYPE(RawDataUdrSchemaUnitTests, readAllContent_Null); 69 DECLARE_METATYPE(RawDataUdrSchemaUnitTests, createObject); 70 DECLARE_METATYPE(RawDataUdrSchemaUnitTests, writeContent); 71 DECLARE_METATYPE(RawDataUdrSchemaUnitTests, writeContent_Null);
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/dports/biology/ugene/ugene-40.1/src/plugins/api_tests/src/core/util/ |
H A D | MsaDbiUtilsUnitTests.h | 189 DECLARE_METATYPE(MsaDbiUtilsUnitTests, trim_noGaps); 190 DECLARE_METATYPE(MsaDbiUtilsUnitTests, trim_leadingGaps); 191 DECLARE_METATYPE(MsaDbiUtilsUnitTests, trim_trailingGaps); 195 DECLARE_METATYPE(MsaDbiUtilsUnitTests, trim_gapsOnly); 197 DECLARE_METATYPE(MsaDbiUtilsUnitTests, removeRegion_oneRow); 200 DECLARE_METATYPE(MsaDbiUtilsUnitTests, removeRegion_allRows); 201 DECLARE_METATYPE(MsaDbiUtilsUnitTests, removeRegion_all); 206 DECLARE_METATYPE(MsaDbiUtilsUnitTests, updateMsa_empty); 208 DECLARE_METATYPE(MsaDbiUtilsUnitTests, updateMsa_newOrder); 209 DECLARE_METATYPE(MsaDbiUtilsUnitTests, updateMsa_newName); [all …]
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H A D | DatatypeSerializeUtilsUnitTest.h | 61 DECLARE_METATYPE(DatatypeSerializeUtilsUnitTest, DNAChromatogramSerializer_true); 62 DECLARE_METATYPE(DatatypeSerializeUtilsUnitTest, DNAChromatogramSerializer_false); 63 DECLARE_METATYPE(DatatypeSerializeUtilsUnitTest, NewickPhyTreeSerializer); 64 DECLARE_METATYPE(DatatypeSerializeUtilsUnitTest, NewickPhyTreeSerializer_failed); 65 DECLARE_METATYPE(DatatypeSerializeUtilsUnitTest, BioStruct3DSerializer); 66 DECLARE_METATYPE(DatatypeSerializeUtilsUnitTest, BioStruct3DSerializer_failed); 67 DECLARE_METATYPE(DatatypeSerializeUtilsUnitTest, WMatrixSerializer); 68 DECLARE_METATYPE(DatatypeSerializeUtilsUnitTest, WMatrixSerializer_failed); 69 DECLARE_METATYPE(DatatypeSerializeUtilsUnitTest, FMatrixSerializer); 70 DECLARE_METATYPE(DatatypeSerializeUtilsUnitTest, FMatrixSerializer_failed);
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/dports/biology/ugene/ugene-40.1/src/plugins/api_tests/src/core/format/sqlite_mod_dbi/ |
H A D | ModDbiSQLiteSpecificUnitTests.h | 210 DECLARE_METATYPE(ModDbiSQLiteSpecificUnitTests, createStep_startMulti); 212 DECLARE_METATYPE(ModDbiSQLiteSpecificUnitTests, createStep_startUser); 213 DECLARE_METATYPE(ModDbiSQLiteSpecificUnitTests, createStep_oneUser2Multi); 214 DECLARE_METATYPE(ModDbiSQLiteSpecificUnitTests, createStep_severalUser); 216 DECLARE_METATYPE(ModDbiSQLiteSpecificUnitTests, createStep_emptyUser); 220 DECLARE_METATYPE(ModDbiSQLiteSpecificUnitTests, userSteps_oneAct_auto); 225 DECLARE_METATYPE(ModDbiSQLiteSpecificUnitTests, userSteps_oneAct_man); 226 DECLARE_METATYPE(ModDbiSQLiteSpecificUnitTests, userSteps_severalAct_man); 230 DECLARE_METATYPE(ModDbiSQLiteSpecificUnitTests, userSteps_oneAct_diffObj); 236 DECLARE_METATYPE(ModDbiSQLiteSpecificUnitTests, updateMsaName_noModTrack); [all …]
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/dports/biology/ugene/ugene-40.1/src/plugins/api_tests/src/core/format/genbank/ |
H A D | LocationParserUnitTests.h | 62 DECLARE_METATYPE(LocationParserTestData, locationParser); 63 DECLARE_METATYPE(LocationParserTestData, locationParserEmpty); 64 DECLARE_METATYPE(LocationParserTestData, locationParserCompare); 65 DECLARE_METATYPE(LocationParserTestData, locationParserDuplicate); 66 DECLARE_METATYPE(LocationParserTestData, locationParserInvalid); 67 DECLARE_METATYPE(LocationParserTestData, hugeLocationParser); 70 DECLARE_METATYPE(LocationParserTestData, buildLocationString); 73 DECLARE_METATYPE(LocationParserTestData, locationOperatorJoin); 75 DECLARE_METATYPE(LocationParserTestData, locationOperatorOrder); 81 DECLARE_METATYPE(LocationParserTestData, locationParserPeriod); [all …]
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/dports/biology/ugene/ugene-40.1/src/plugins/api_tests/src/core/external_script/base_scheme_interface/ |
H A D | CInterfaceSasTests.h | 63 DECLARE_METATYPE(CInterfaceSasTests, align_with_kalign_sas) 64 DECLARE_METATYPE(CInterfaceSasTests, align_with_mafft_sas) 68 DECLARE_METATYPE(CInterfaceSasTests, basic_align_sas) 70 DECLARE_METATYPE(CInterfaceSasTests, cd_search_sas) 71 DECLARE_METATYPE(CInterfaceSasTests, dna_statistics_sas) 72 DECLARE_METATYPE(CInterfaceSasTests, faqual2fastq_sas) 74 DECLARE_METATYPE(CInterfaceSasTests, find_repeats_sas) 75 DECLARE_METATYPE(CInterfaceSasTests, hmm2_build_sas) 81 DECLARE_METATYPE(CInterfaceSasTests, orf_marker_sas) 82 DECLARE_METATYPE(CInterfaceSasTests, remote_blast_sas) [all …]
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H A D | CInterfaceManualTests.h | 56 DECLARE_METATYPE(CInterfaceManualTests, basic_align); 57 DECLARE_METATYPE(CInterfaceManualTests, faqual2fastq); 58 DECLARE_METATYPE(CInterfaceManualTests, msa2clustal); 60 DECLARE_METATYPE(CInterfaceManualTests, seq2gen); 61 DECLARE_METATYPE(CInterfaceManualTests, tfbs); 63 DECLARE_METATYPE(CInterfaceManualTests, search_HMM); 64 DECLARE_METATYPE(CInterfaceManualTests, search_TFBS); 65 DECLARE_METATYPE(CInterfaceManualTests, call_variants); 66 DECLARE_METATYPE(CInterfaceManualTests, chip_seq); 68 DECLARE_METATYPE(CInterfaceManualTests, tuxedo_main); [all …]
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/dports/biology/ugene/ugene-40.1/src/plugins/api_tests/src/core/format/sqlite_sequence_dbi/ |
H A D | SequenceDbiSQLiteSpecificUnitTests.h | 102 DECLARE_METATYPE(SequenceDbiSQLiteSpecificUnitTests, updateSeqData_noModTrack); 103 DECLARE_METATYPE(SequenceDbiSQLiteSpecificUnitTests, updateSeqData_emptyHint); 105 DECLARE_METATYPE(SequenceDbiSQLiteSpecificUnitTests, updateSeqData_clear); 106 DECLARE_METATYPE(SequenceDbiSQLiteSpecificUnitTests, updateSeqData_begin); 107 DECLARE_METATYPE(SequenceDbiSQLiteSpecificUnitTests, updateSeqData_middle); 109 DECLARE_METATYPE(SequenceDbiSQLiteSpecificUnitTests, updateSeqData_end); 114 DECLARE_METATYPE(SequenceDbiSQLiteSpecificUnitTests, updateSeqData_clear_undo); 115 DECLARE_METATYPE(SequenceDbiSQLiteSpecificUnitTests, updateSeqData_begin_undo); 118 DECLARE_METATYPE(SequenceDbiSQLiteSpecificUnitTests, updateSeqData_end_undo); 123 DECLARE_METATYPE(SequenceDbiSQLiteSpecificUnitTests, updateSeqData_clear_redo); [all …]
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/dports/biology/ugene/ugene-40.1/src/plugins/api_tests/src/core/dbi/udr/ |
H A D | UdrDbiUnitTests.h | 96 DECLARE_METATYPE(UdrDbiUnitTests, getRecord); 97 DECLARE_METATYPE(UdrDbiUnitTests, addRecord_1); 98 DECLARE_METATYPE(UdrDbiUnitTests, addRecord_2); 100 DECLARE_METATYPE(UdrDbiUnitTests, removeRecord); 101 DECLARE_METATYPE(UdrDbiUnitTests, OutputStream_write); 102 DECLARE_METATYPE(UdrDbiUnitTests, OutputStream_write_2); 103 DECLARE_METATYPE(UdrDbiUnitTests, InputStream_read); 104 DECLARE_METATYPE(UdrDbiUnitTests, InputStream_skip_read); 109 DECLARE_METATYPE(UdrDbiUnitTests, createObject); 111 DECLARE_METATYPE(UdrDbiUnitTests, getObjectRecords_1); [all …]
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/dports/biology/ugene/ugene-40.1/src/plugins/api_tests/src/core/dbi/features/ |
H A D | FeatureDbiUnitTests.h | 97 DECLARE_METATYPE(FeatureDbiUnitTests, createFeature); 98 DECLARE_METATYPE(FeatureDbiUnitTests, getFeature); 99 DECLARE_METATYPE(FeatureDbiUnitTests, countFeatures); 100 DECLARE_METATYPE(FeatureDbiUnitTests, getFeatures); 101 DECLARE_METATYPE(FeatureDbiUnitTests, getFeatureKeys); 102 DECLARE_METATYPE(FeatureDbiUnitTests, addKey); 104 DECLARE_METATYPE(FeatureDbiUnitTests, removeAllKeys); 105 DECLARE_METATYPE(FeatureDbiUnitTests, updateKeyValue); 106 DECLARE_METATYPE(FeatureDbiUnitTests, updateLocation); 107 DECLARE_METATYPE(FeatureDbiUnitTests, updateName); [all …]
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/dports/biology/ugene/ugene-40.1/src/plugins/api_tests/src/core/gobjects/ |
H A D | FeaturesTableObjectUnitTest.h | 64 DECLARE_METATYPE(FeatureTableObjectUnitTest, addAnnotationSingleRegion) 66 DECLARE_METATYPE(FeatureTableObjectUnitTest, getAnnotations) 67 DECLARE_METATYPE(FeatureTableObjectUnitTest, getRootGroup) 68 DECLARE_METATYPE(FeatureTableObjectUnitTest, addAnnotationsToRootGroup) 69 DECLARE_METATYPE(FeatureTableObjectUnitTest, addAnnotationsToSubgroup) 70 DECLARE_METATYPE(FeatureTableObjectUnitTest, removeAnnotation) 71 DECLARE_METATYPE(FeatureTableObjectUnitTest, removeAnnotations) 72 DECLARE_METATYPE(FeatureTableObjectUnitTest, clone) 73 DECLARE_METATYPE(FeatureTableObjectUnitTest, getAnnotationsByName) 74 DECLARE_METATYPE(FeatureTableObjectUnitTest, getAnnotationsByRegion) [all …]
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H A D | PhyTreeObjectUnitTests.h | 74 DECLARE_METATYPE(PhyTreeObjectUnitTests, createInstance); 75 DECLARE_METATYPE(PhyTreeObjectUnitTests, createInstance_WrongDbi); 76 DECLARE_METATYPE(PhyTreeObjectUnitTests, getTree); 77 DECLARE_METATYPE(PhyTreeObjectUnitTests, getTree_Null); 78 DECLARE_METATYPE(PhyTreeObjectUnitTests, setTree); 79 DECLARE_METATYPE(PhyTreeObjectUnitTests, clone); 80 DECLARE_METATYPE(PhyTreeObjectUnitTests, clone_NullDbi); 81 DECLARE_METATYPE(PhyTreeObjectUnitTests, clone_NullObj); 82 DECLARE_METATYPE(PhyTreeObjectUnitTests, remove);
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H A D | TextObjectUnitTests.h | 74 DECLARE_METATYPE(TextObjectUnitTests, createInstance); 75 DECLARE_METATYPE(TextObjectUnitTests, createInstance_WrongDbi); 76 DECLARE_METATYPE(TextObjectUnitTests, getText); 77 DECLARE_METATYPE(TextObjectUnitTests, getText_Null); 78 DECLARE_METATYPE(TextObjectUnitTests, setText); 79 DECLARE_METATYPE(TextObjectUnitTests, clone); 80 DECLARE_METATYPE(TextObjectUnitTests, clone_NullDbi); 81 DECLARE_METATYPE(TextObjectUnitTests, clone_NullObj); 82 DECLARE_METATYPE(TextObjectUnitTests, remove);
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H A D | DNAChromatogramObjectUnitTests.h | 76 DECLARE_METATYPE(DNAChromatogramObjectUnitTests, createInstance); 77 DECLARE_METATYPE(DNAChromatogramObjectUnitTests, createInstance_WrongDbi); 78 DECLARE_METATYPE(DNAChromatogramObjectUnitTests, getChromatogram); 79 DECLARE_METATYPE(DNAChromatogramObjectUnitTests, getChromatogram_Null); 80 DECLARE_METATYPE(DNAChromatogramObjectUnitTests, clone); 81 DECLARE_METATYPE(DNAChromatogramObjectUnitTests, clone_NullDbi); 82 DECLARE_METATYPE(DNAChromatogramObjectUnitTests, clone_NullObj); 83 DECLARE_METATYPE(DNAChromatogramObjectUnitTests, remove);
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H A D | BioStruct3DObjectUnitTests.h | 78 DECLARE_METATYPE(BioStruct3DObjectUnitTests, createInstance); 79 DECLARE_METATYPE(BioStruct3DObjectUnitTests, createInstance_WrongDbi); 80 DECLARE_METATYPE(BioStruct3DObjectUnitTests, getBioStruct3D); 81 DECLARE_METATYPE(BioStruct3DObjectUnitTests, getBioStruct3D_Null); 82 DECLARE_METATYPE(BioStruct3DObjectUnitTests, clone); 83 DECLARE_METATYPE(BioStruct3DObjectUnitTests, clone_NullDbi); 84 DECLARE_METATYPE(BioStruct3DObjectUnitTests, clone_NullObj); 85 DECLARE_METATYPE(BioStruct3DObjectUnitTests, remove);
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H A D | MsaObjectUnitTests.h | 61 DECLARE_METATYPE(MsaObjectUnitTests, getMAlignment); 62 DECLARE_METATYPE(MsaObjectUnitTests, setMAlignment); 63 DECLARE_METATYPE(MsaObjectUnitTests, deleteGap_trailingGaps); 64 DECLARE_METATYPE(MsaObjectUnitTests, deleteGap_regionWithNonGapSymbols); 65 DECLARE_METATYPE(MsaObjectUnitTests, deleteGap_gapRegion);
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/dports/biology/ugene/ugene-40.1/src/plugins/api_tests/src/core/format/sqlite_object_dbi/ |
H A D | SQLiteObjectDbiUnitTests.h | 119 DECLARE_METATYPE(SQLiteObjectDbiUnitTests, removeMsaObject); 120 DECLARE_METATYPE(SQLiteObjectDbiUnitTests, setTrackModType); 122 DECLARE_METATYPE(SQLiteObjectDbiUnitTests, canUndoRedo_noTrack); 123 DECLARE_METATYPE(SQLiteObjectDbiUnitTests, canUndoRedo_noAction); 124 DECLARE_METATYPE(SQLiteObjectDbiUnitTests, canUndoRedo_lastState); 125 DECLARE_METATYPE(SQLiteObjectDbiUnitTests, canUndoRedo_firstState); 126 DECLARE_METATYPE(SQLiteObjectDbiUnitTests, canUndoRedo_midState); 127 DECLARE_METATYPE(SQLiteObjectDbiUnitTests, canUndoRedo_oneUserStep); 129 DECLARE_METATYPE(SQLiteObjectDbiUnitTests, commonUndoRedo_user3Multi); 130 DECLARE_METATYPE(SQLiteObjectDbiUnitTests, commonUndoRedo_actionAfterUndo); [all …]
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/dports/biology/ugene/ugene-40.1/src/plugins/api_tests/src/core/datatype/annotations/ |
H A D | AnnotationUnitTests.h | 43 DECLARE_METATYPE(AnnotationUnitTest, get_IdObjectData) 44 DECLARE_METATYPE(AnnotationUnitTest, getSet_Name) 45 DECLARE_METATYPE(AnnotationUnitTest, getSet_LocationOperator) 46 DECLARE_METATYPE(AnnotationUnitTest, getSet_Strand) 47 DECLARE_METATYPE(AnnotationUnitTest, getSet_Location) 48 DECLARE_METATYPE(AnnotationUnitTest, getSet_Regions) 49 DECLARE_METATYPE(AnnotationUnitTest, getSet_Qualifiers) 50 DECLARE_METATYPE(AnnotationUnitTest, find_Qualifiers) 51 DECLARE_METATYPE(AnnotationUnitTest, get_Group) 52 DECLARE_METATYPE(AnnotationUnitTest, getSet_Case)
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H A D | AnnotationGroupUnitTests.h | 38 DECLARE_METATYPE(AnnotationGroupUnitTest, get_IdObject) 39 DECLARE_METATYPE(AnnotationGroupUnitTest, getSet_Name) 40 DECLARE_METATYPE(AnnotationGroupUnitTest, groupHierarchy) 41 DECLARE_METATYPE(AnnotationGroupUnitTest, getSet_Annotations) 42 DECLARE_METATYPE(AnnotationGroupUnitTest, findAnnotationsInSubtree) 43 DECLARE_METATYPE(AnnotationGroupUnitTest, getSet_Subgroups)
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/dports/biology/ugene/ugene-40.1/src/plugins/api_tests/src/core/format/fastq/ |
H A D | FastqUnitTests.h | 49 DECLARE_METATYPE(FasqUnitTests, checkRawData); 50 DECLARE_METATYPE(FasqUnitTests, checkRawDataInvalidHeaderStartWith); 51 DECLARE_METATYPE(FasqUnitTests, checkRawDataInvalidQualityHeaderStartWith); 52 DECLARE_METATYPE(FasqUnitTests, checkRawDataMultiple);
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/dports/biology/ugene/ugene-40.1/src/plugins/api_tests/src/core/dbi/msa/ |
H A D | MsaDbiUnitTests.h | 60 DECLARE_METATYPE(MsaDbiUnitTests, createMsaObject); 61 DECLARE_METATYPE(MsaDbiUnitTests, addRows); 62 DECLARE_METATYPE(MsaDbiUnitTests, removeRows);
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