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/dports/math/R/R-4.1.2/src/library/stats/tests/
H A Dnls.R97 DNase1 <- subset(DNase, Run == 1) globalVar
98 DNase1$wts <- rep(8:1, each = 2)
100 data = DNase1, weights = wts)
105 data = DNase1, weights = wts,
112 data = DNase1, weights = wts,
121 ft <- with(DNase1, density - fitted(fm3)/sqrt(wts))
124 r <- with(DNase1, -residuals(fm3)/sqrt(wts))
127 data = DNase1, start = list(Asym = 3, xmid = 0))
132 data = DNase1, weights = wts,
142 data = DNase1, weights = wts,
[all …]
H A Dnls.Rout.save201 > DNase1 <- subset(DNase, Run == 1)
202 > DNase1$wts <- rep(8:1, each = 2)
204 + data = DNase1, weights = wts)
222 + data = DNase1, weights = wts,
242 + data = DNase1, weights = wts,
271 > ft <- with(DNase1, density - fitted(fm3)/sqrt(wts))
274 > r <- with(DNase1, -residuals(fm3)/sqrt(wts))
278 + data = DNase1, start = list(Asym = 3, xmid = 0))
290 + data = DNase1, weights = wts,
313 + data = DNase1, weights = wts,
[all …]
/dports/math/libRmath/R-4.1.1/src/library/stats/tests/
H A Dnls.R97 DNase1 <- subset(DNase, Run == 1) globalVar
98 DNase1$wts <- rep(8:1, each = 2)
100 data = DNase1, weights = wts)
105 data = DNase1, weights = wts,
112 data = DNase1, weights = wts,
121 ft <- with(DNase1, density - fitted(fm3)/sqrt(wts))
124 r <- with(DNase1, -residuals(fm3)/sqrt(wts))
127 data = DNase1, start = list(Asym = 3, xmid = 0))
132 data = DNase1, weights = wts,
142 data = DNase1, weights = wts,
[all …]
H A Dnls.Rout.save201 > DNase1 <- subset(DNase, Run == 1)
202 > DNase1$wts <- rep(8:1, each = 2)
204 + data = DNase1, weights = wts)
222 + data = DNase1, weights = wts,
242 + data = DNase1, weights = wts,
271 > ft <- with(DNase1, density - fitted(fm3)/sqrt(wts))
274 > r <- with(DNase1, -residuals(fm3)/sqrt(wts))
278 + data = DNase1, start = list(Asym = 3, xmid = 0))
290 + data = DNase1, weights = wts,
313 + data = DNase1, weights = wts,
[all …]
/dports/math/R-cran-robustbase/robustbase/tests/
H A Dnlrob-tst.R6 DNase1 <- DNase[ DNase$Run == 1, ] globalVar
7 Y <- DNase1[,"density"] # for convenience below
11 data = DNase1, start = list(Asym = 3, xmid = 0, scal = 1), trace=TRUE)
16 rm1 <- nlrob(formula(fm1), data = DNase1, trace = TRUE,
21 identical3(c(fitted(fm1)), predict(fm1), predict(fm1, newdata=DNase1)),
23 identical3(fitted(rm1), predict(rm1), predict(rm1, newdata=DNase1)),
38 ww <- sqrt(DNase1[,"conc"])
H A Dnlregrob-tst.R306 DNase1 <- DNase[DNase$Run == 1,]
325 fMM <- robustbase:::nlrob.MM(form, data = DNase1,
333 ftau <- robustbase:::nlrob.tau(form, data = DNase1,
336 fCM <- robustbase:::nlrob.CM (form, data = DNase1,
339 fmtl <- robustbase:::nlrob.mtl(form, data = DNase1,
365 gMM <- nlrob(form, data = DNase1, method = "MM",
367 gtau <- nlrob(form, data = DNase1, method = "tau",
370 gCM <- nlrob(form, data = DNase1, method = "CM",
372 gmtl <- nlrob(form, data = DNase1, method = "mtl",
/dports/math/R-cran-robustbase/robustbase/man/
H A Dnlrob-algos.Rd145 DNase1 <- DNase[DNase$Run == 1,]
150 fMM <- robustbase:::nlrob.MM(form, data = DNase1,
158 gMM <- nlrob(form, data = DNase1, method = "MM",
167 gtau <- nlrob(form, data = DNase1, method = "tau",
172 gCM <- nlrob(form, data = DNase1, method = "CM",
174 gmtl <- nlrob(form, data = DNase1, method = "mtl",
H A Dnlrob.Rd225 DNase1 <- DNase[ DNase$Run == 1, ]
233 data = DNase1,
240 data = DNase1, trace = TRUE,
248 data = DNase1,
255 data = DNase1, start = c( xmid = 0, scal = 1 ),
265 DN2 <- DNase1
301 DNase1 <- DNase[DNase$Run == 1,]
303 gMM <- nlrob(form, data = DNase1, method = "MM",
308 gCM <- nlrob(form, data = DNase1, method = "CM",
/dports/math/R/R-4.1.2/src/library/stats/man/
H A Dsigma.Rd74 DNase1 <- subset(DNase, Run == 1)
75 fm.DN1 <- nls(density ~ SSlogis(log(conc), Asym, xmid, scal), DNase1)
H A Dnls.Rd168 DNase1 <- subset(DNase, Run == 1)
171 fm1DNase1 <- nls(density ~ SSlogis(log(conc), Asym, xmid, scal), DNase1)
180 data = DNase1,
187 data = DNase1,
193 data = DNase1,
/dports/math/libRmath/R-4.1.1/src/library/stats/man/
H A Dsigma.Rd74 DNase1 <- subset(DNase, Run == 1)
75 fm.DN1 <- nls(density ~ SSlogis(log(conc), Asym, xmid, scal), DNase1)
H A Dnls.Rd168 DNase1 <- subset(DNase, Run == 1)
171 fm1DNase1 <- nls(density ~ SSlogis(log(conc), Asym, xmid, scal), DNase1)
180 data = DNase1,
187 data = DNase1,
193 data = DNase1,
/dports/biology/snpeff/snpEff/examples/
H A Dtest.1KG.ann_reg.vcf328 …variant|MODIFIER|||REGULATION&DNase1:NHEK|NHEK_DNase1_740|||||||||,C|regulatory_region_variant|MOD…
3564 …DNase1:NHEK|NHEK_DNase1_2282|||||||||,A|regulatory_region_variant|MODIFIER|||REGULATION&H3K27me3:N…
7470 …ariant|MODIFIER|||REGULATION&DNase1:NHEK|NHEK_DNase1_3299|||||||||,A|regulatory_region_variant|MOD…
7471 …ariant|MODIFIER|||REGULATION&DNase1:NHEK|NHEK_DNase1_3299|||||||||,T|regulatory_region_variant|MOD…
7472 …ariant|MODIFIER|||REGULATION&DNase1:NHEK|NHEK_DNase1_3299|||||||||,A|regulatory_region_variant|MOD…
7473 …ariant|MODIFIER|||REGULATION&DNase1:NHEK|NHEK_DNase1_3299|||||||||,T|regulatory_region_variant|MOD…
7474 …ariant|MODIFIER|||REGULATION&DNase1:NHEK|NHEK_DNase1_3299|||||||||,A|regulatory_region_variant|MOD…
7475 …ariant|MODIFIER|||REGULATION&DNase1:NHEK|NHEK_DNase1_3299|||||||||,G|regulatory_region_variant|MOD…
7476 …ariant|MODIFIER|||REGULATION&DNase1:NHEK|NHEK_DNase1_3299|||||||||,T|regulatory_region_variant|MOD…
7551 …ariant|MODIFIER|||REGULATION&DNase1:NHEK|NHEK_DNase1_3330|||||||||,A|regulatory_region_variant|MOD…
[all …]
/dports/math/R/R-4.1.2/tests/Examples/
H A Dstats-Ex.Rout.save10935 > DNase1 <- subset(DNase, Run == 1)
10938 > fm1DNase1 <- nls(density ~ SSlogis(log(conc), Asym, xmid, scal), DNase1)
10966 + data = DNase1,
10986 + data = DNase1,
11005 + data = DNase1,
15972 > DNase1 <- subset(DNase, Run == 1)
15973 > fm.DN1 <- nls(density ~ SSlogis(log(conc), Asym, xmid, scal), DNase1)
/dports/math/libRmath/R-4.1.1/tests/Examples/
H A Dstats-Ex.Rout.save10935 > DNase1 <- subset(DNase, Run == 1)
10938 > fm1DNase1 <- nls(density ~ SSlogis(log(conc), Asym, xmid, scal), DNase1)
10966 + data = DNase1,
10986 + data = DNase1,
11005 + data = DNase1,
15968 > DNase1 <- subset(DNase, Run == 1)
15969 > fm.DN1 <- nls(density ~ SSlogis(log(conc), Asym, xmid, scal), DNase1)