/dports/biology/ugene/ugene-40.1/src/plugins_3rdparty/umuscle/src/muscle/ |
H A D | diaglist.h | 22 class DiagList 25 DiagList() in DiagList() function 29 ~DiagList() in ~DiagList() 54 void Copy(const DiagList &DL); 84 unsigned uLengthY, DiagList &DL); 86 unsigned uLengthY, DiagList &DL); 87 void MergeDiags(DiagList &DL);
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H A D | diaglist.cpp | 9 void DiagList::Add(const Diag &d) in Add() 26 const Diag &DiagList::Get(unsigned uIndex) const in Get() 33 void DiagList::LogMe() const in LogMe() 46 void DiagList::FromPath(const PWPath &Path) in FromPath() 83 bool DiagList::NonZeroIntersection(const Diag &d) const in NonZeroIntersection() 179 void MergeDiags(DiagList &DL) in MergeDiags() 195 DiagList NewList; in MergeDiags() 221 void DiagList::DeleteIncompatible() in DeleteIncompatible() 303 void DiagList::Copy(const DiagList &DL) in Copy() 312 bool DiagList::IsSorted() const in IsSorted() [all …]
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/dports/biology/muscle/muscle-3.8.1551/ |
H A D | diaglist.h | 22 class DiagList 25 DiagList() in DiagList() function 29 ~DiagList() in ~DiagList() 54 void Copy(const DiagList &DL); 84 unsigned uLengthY, DiagList &DL); 86 unsigned uLengthY, DiagList &DL); 87 void MergeDiags(DiagList &DL);
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H A D | diaglist.cpp | 8 void DiagList::Add(const Diag &d) in Add() 25 const Diag &DiagList::Get(unsigned uIndex) const in Get() 32 void DiagList::LogMe() const in LogMe() 45 void DiagList::FromPath(const PWPath &Path) in FromPath() 80 bool DiagList::NonZeroIntersection(const Diag &d) const in NonZeroIntersection() 176 void MergeDiags(DiagList &DL) in MergeDiags() 190 DiagList NewList; in MergeDiags() 216 void DiagList::DeleteIncompatible() in DeleteIncompatible() 297 void DiagList::Copy(const DiagList &DL) in Copy() 306 bool DiagList::IsSorted() const in IsSorted() [all …]
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/dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/src/jdk.jshell/share/classes/jdk/jshell/ |
H A D | Unit.java | 70 private final DiagList generatedDiagnostics; 78 private DiagList compilationDiagnostics; 88 DiagList generatedDiagnostics) { in Unit() 193 void setDiagnostics(DiagList diags) { in setDiagnostics() 373 private DiagList computeDiagnostics() { in computeDiagnostics() 374 DiagList diagnostics = new DiagList(); in computeDiagnostics() 486 private final DiagList otherErrors = new DiagList(); 487 private final DiagList otherAll = new DiagList(); 489 UnresolvedExtractor(DiagList diags) { in UnresolvedExtractor() 512 DiagList otherCorralledErrors() { in otherCorralledErrors() [all …]
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H A D | Snippet.java | 568 private DiagList diagnostics; 569 private final DiagList syntheticDiags; 572 SubKind subkind, DiagList syntheticDiags) { in Snippet() 579 ? new DiagList() in Snippet() 651 DiagList diagnostics() { in diagnostics() 655 DiagList syntheticDiags() { in syntheticDiags() 690 void setCompilationStatus(Status status, List<String> unresolved, DiagList diagnostics) { in setCompilationStatus() 696 void setDiagnostics(DiagList diagnostics) { in setDiagnostics() 700 void setFailed(DiagList diagnostics) { in setFailed()
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H A D | DiagList.java | 38 final class DiagList extends ArrayList<Diag> { class 45 DiagList() { in DiagList() method in DiagList 49 DiagList(Diag d) { in DiagList() method in DiagList 54 DiagList(Collection<? extends Diag> c) { in DiagList() method in DiagList 107 DiagList ofUnit(Unit u) { in ofUnit() 113 .collect(Collectors.toCollection(DiagList::new)); in ofUnit()
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/dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/src/jdk.jshell/share/classes/jdk/jshell/ |
H A D | Unit.java | 70 private final DiagList generatedDiagnostics; 78 private DiagList compilationDiagnostics; 88 DiagList generatedDiagnostics) { in Unit() 193 void setDiagnostics(DiagList diags) { in setDiagnostics() 373 private DiagList computeDiagnostics() { in computeDiagnostics() 374 DiagList diagnostics = new DiagList(); in computeDiagnostics() 486 private final DiagList otherErrors = new DiagList(); 487 private final DiagList otherAll = new DiagList(); 489 UnresolvedExtractor(DiagList diags) { in UnresolvedExtractor() 512 DiagList otherCorralledErrors() { in otherCorralledErrors() [all …]
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H A D | Snippet.java | 570 private DiagList diagnostics; 571 private final DiagList syntheticDiags; 574 SubKind subkind, DiagList syntheticDiags) { in Snippet() 581 ? new DiagList() in Snippet() 653 DiagList diagnostics() { in diagnostics() 657 DiagList syntheticDiags() { in syntheticDiags() 692 void setCompilationStatus(Status status, List<String> unresolved, DiagList diagnostics) { in setCompilationStatus() 698 void setDiagnostics(DiagList diagnostics) { in setDiagnostics() 702 void setFailed(DiagList diagnostics) { in setFailed()
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H A D | DiagList.java | 38 final class DiagList extends ArrayList<Diag> { class 45 DiagList() { in DiagList() method in DiagList 49 DiagList(Diag d) { in DiagList() method in DiagList 54 DiagList(Collection<? extends Diag> c) { in DiagList() method in DiagList 107 DiagList ofUnit(Unit u) { in ofUnit() 113 .collect(Collectors.toCollection(DiagList::new)); in ofUnit()
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/dports/java/openjdk15/jdk15u-jdk-15.0.6-1-1/src/jdk.jshell/share/classes/jdk/jshell/ |
H A D | Unit.java | 70 private final DiagList generatedDiagnostics; 78 private DiagList compilationDiagnostics; 88 DiagList generatedDiagnostics) { in Unit() 193 void setDiagnostics(DiagList diags) { in setDiagnostics() 373 private DiagList computeDiagnostics() { in computeDiagnostics() 374 DiagList diagnostics = new DiagList(); in computeDiagnostics() 486 private final DiagList otherErrors = new DiagList(); 487 private final DiagList otherAll = new DiagList(); 489 UnresolvedExtractor(DiagList diags) { in UnresolvedExtractor() 512 DiagList otherCorralledErrors() { in otherCorralledErrors() [all …]
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H A D | Snippet.java | 587 private DiagList diagnostics; 588 private final DiagList syntheticDiags; 591 SubKind subkind, DiagList syntheticDiags) { in Snippet() 598 ? new DiagList() in Snippet() 670 DiagList diagnostics() { in diagnostics() 674 DiagList syntheticDiags() { in syntheticDiags() 709 void setCompilationStatus(Status status, List<String> unresolved, DiagList diagnostics) { in setCompilationStatus() 715 void setDiagnostics(DiagList diagnostics) { in setDiagnostics() 719 void setFailed(DiagList diagnostics) { in setFailed()
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H A D | DiagList.java | 38 final class DiagList extends ArrayList<Diag> { class 45 DiagList() { in DiagList() method in DiagList 49 DiagList(Diag d) { in DiagList() method in DiagList 54 DiagList(Collection<? extends Diag> c) { in DiagList() method in DiagList 107 DiagList ofUnit(Unit u) { in ofUnit() 113 .collect(Collectors.toCollection(DiagList::new)); in ofUnit()
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/dports/java/openjdk16/jdk16u-jdk-16.0.2-7-1/src/jdk.jshell/share/classes/jdk/jshell/ |
H A D | Unit.java | 70 private final DiagList generatedDiagnostics; 78 private DiagList compilationDiagnostics; 88 DiagList generatedDiagnostics) { in Unit() 193 void setDiagnostics(DiagList diags) { in setDiagnostics() 372 private DiagList computeDiagnostics() { in computeDiagnostics() 373 DiagList diagnostics = new DiagList(); in computeDiagnostics() 485 private final DiagList otherErrors = new DiagList(); 486 private final DiagList otherAll = new DiagList(); 488 UnresolvedExtractor(DiagList diags) { in UnresolvedExtractor() 511 DiagList otherCorralledErrors() { in otherCorralledErrors() [all …]
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H A D | Snippet.java | 587 private DiagList diagnostics; 588 private final DiagList syntheticDiags; 591 SubKind subkind, DiagList syntheticDiags) { in Snippet() 598 ? new DiagList() in Snippet() 670 DiagList diagnostics() { in diagnostics() 674 DiagList syntheticDiags() { in syntheticDiags() 709 void setCompilationStatus(Status status, List<String> unresolved, DiagList diagnostics) { in setCompilationStatus() 715 void setDiagnostics(DiagList diagnostics) { in setDiagnostics() 719 void setFailed(DiagList diagnostics) { in setFailed()
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H A D | DiagList.java | 38 final class DiagList extends ArrayList<Diag> { class 45 DiagList() { in DiagList() method in DiagList 49 DiagList(Diag d) { in DiagList() method in DiagList 54 DiagList(Collection<? extends Diag> c) { in DiagList() method in DiagList 107 DiagList ofUnit(Unit u) { in ofUnit() 113 .collect(Collectors.toCollection(DiagList::new)); in ofUnit()
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/dports/java/openjdk17/jdk17u-jdk-17.0.1-12-1/src/jdk.jshell/share/classes/jdk/jshell/ |
H A D | Unit.java | 69 private final DiagList generatedDiagnostics; 77 private DiagList compilationDiagnostics; 87 DiagList generatedDiagnostics) { in Unit() 192 void setDiagnostics(DiagList diags) { in setDiagnostics() 371 private DiagList computeDiagnostics() { in computeDiagnostics() 372 DiagList diagnostics = new DiagList(); in computeDiagnostics() 484 private final DiagList otherErrors = new DiagList(); 485 private final DiagList otherAll = new DiagList(); 487 UnresolvedExtractor(DiagList diags) { in UnresolvedExtractor() 510 DiagList otherCorralledErrors() { in otherCorralledErrors() [all …]
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H A D | Snippet.java | 579 private DiagList diagnostics; 580 private final DiagList syntheticDiags; 583 SubKind subkind, DiagList syntheticDiags) { in Snippet() 590 ? new DiagList() in Snippet() 662 DiagList diagnostics() { in diagnostics() 666 DiagList syntheticDiags() { in syntheticDiags() 701 void setCompilationStatus(Status status, List<String> unresolved, DiagList diagnostics) { in setCompilationStatus() 707 void setDiagnostics(DiagList diagnostics) { in setDiagnostics() 711 void setFailed(DiagList diagnostics) { in setFailed()
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/dports/java/openjdk11-jre/jdk11u-jdk-11.0.13-8-1/src/jdk.jshell/share/classes/jdk/jshell/ |
H A D | Unit.java | 70 private final DiagList generatedDiagnostics; 78 private DiagList compilationDiagnostics; 88 DiagList generatedDiagnostics) { in Unit() 193 void setDiagnostics(DiagList diags) { in setDiagnostics() 373 private DiagList computeDiagnostics() { in computeDiagnostics() 374 DiagList diagnostics = new DiagList(); in computeDiagnostics() 486 private final DiagList otherErrors = new DiagList(); 487 private final DiagList otherAll = new DiagList(); 489 UnresolvedExtractor(DiagList diags) { in UnresolvedExtractor() 512 DiagList otherCorralledErrors() { in otherCorralledErrors() [all …]
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H A D | Snippet.java | 568 private DiagList diagnostics; 569 private final DiagList syntheticDiags; 572 SubKind subkind, DiagList syntheticDiags) { in Snippet() 579 ? new DiagList() in Snippet() 651 DiagList diagnostics() { in diagnostics() 655 DiagList syntheticDiags() { in syntheticDiags() 690 void setCompilationStatus(Status status, List<String> unresolved, DiagList diagnostics) { in setCompilationStatus() 696 void setDiagnostics(DiagList diagnostics) { in setDiagnostics() 700 void setFailed(DiagList diagnostics) { in setFailed()
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H A D | DiagList.java | 38 final class DiagList extends ArrayList<Diag> { class 45 DiagList() { in DiagList() method in DiagList 49 DiagList(Diag d) { in DiagList() method in DiagList 54 DiagList(Collection<? extends Diag> c) { in DiagList() method in DiagList 107 DiagList ofUnit(Unit u) { in ofUnit() 113 .collect(Collectors.toCollection(DiagList::new)); in ofUnit()
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/dports/java/openjdk12/openjdk-jdk12u-jdk-12.0.2-10-4/src/jdk.jshell/share/classes/jdk/jshell/ |
H A D | Unit.java | 70 private final DiagList generatedDiagnostics; 78 private DiagList compilationDiagnostics; 88 DiagList generatedDiagnostics) { in Unit() 193 void setDiagnostics(DiagList diags) { in setDiagnostics() 373 private DiagList computeDiagnostics() { in computeDiagnostics() 374 DiagList diagnostics = new DiagList(); in computeDiagnostics() 486 private final DiagList otherErrors = new DiagList(); 487 private final DiagList otherAll = new DiagList(); 489 UnresolvedExtractor(DiagList diags) { in UnresolvedExtractor() 512 DiagList otherCorralledErrors() { in otherCorralledErrors() [all …]
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H A D | Snippet.java | 568 private DiagList diagnostics; 569 private final DiagList syntheticDiags; 572 SubKind subkind, DiagList syntheticDiags) { in Snippet() 579 ? new DiagList() in Snippet() 651 DiagList diagnostics() { in diagnostics() 655 DiagList syntheticDiags() { in syntheticDiags() 690 void setCompilationStatus(Status status, List<String> unresolved, DiagList diagnostics) { in setCompilationStatus() 696 void setDiagnostics(DiagList diagnostics) { in setDiagnostics() 700 void setFailed(DiagList diagnostics) { in setFailed()
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/dports/java/openjdk14/jdk14u-jdk-14.0.2-12-1/src/jdk.jshell/share/classes/jdk/jshell/ |
H A D | Unit.java | 70 private final DiagList generatedDiagnostics; 78 private DiagList compilationDiagnostics; 88 DiagList generatedDiagnostics) { in Unit() 193 void setDiagnostics(DiagList diags) { in setDiagnostics() 373 private DiagList computeDiagnostics() { in computeDiagnostics() 374 DiagList diagnostics = new DiagList(); in computeDiagnostics() 486 private final DiagList otherErrors = new DiagList(); 487 private final DiagList otherAll = new DiagList(); 489 UnresolvedExtractor(DiagList diags) { in UnresolvedExtractor() 512 DiagList otherCorralledErrors() { in otherCorralledErrors() [all …]
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H A D | Snippet.java | 587 private DiagList diagnostics; 588 private final DiagList syntheticDiags; 591 SubKind subkind, DiagList syntheticDiags) { in Snippet() 598 ? new DiagList() in Snippet() 670 DiagList diagnostics() { in diagnostics() 674 DiagList syntheticDiags() { in syntheticDiags() 709 void setCompilationStatus(Status status, List<String> unresolved, DiagList diagnostics) { in setCompilationStatus() 715 void setDiagnostics(DiagList diagnostics) { in setDiagnostics() 719 void setFailed(DiagList diagnostics) { in setFailed()
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