Searched refs:EditedSequence (Results 1 – 7 of 7) sorted by relevance
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/gnomon/ |
H A D | gnomon_seq.cpp | 620 void CAlignMap::EditedSequence(const Vec& original_sequence, Vec& edited_sequence, bool includehole… in EditedSequence() function in CAlignMap 676 void CAlignMap::EditedSequence<CResidueVec>(const CResidueVec& original_sequence, CResidueVec& edit… 678 void CAlignMap::EditedSequence<CEResidueVec>(const CEResidueVec& original_sequence, CEResidueVec& e… 680 void CAlignMap::EditedSequence<string>(const string& original_sequence, string& edited_sequence, bo…
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H A D | score.cpp | 173 m_map.EditedSequence(original_sequence, sequence); in ConstructSequenceAndMaps() 443 mrnamap.EditedSequence(m_seq[ePlus], mRNA); in Init() 1395 mrnamap.EditedSequence(m_data->m_ds[ePlus], mrna); in GetScore()
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H A D | annot.cpp | 734 mrnamap.EditedSequence(seq, vec); in transform_model()
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H A D | gnomon_objmgr.cpp | 487 amap.EditedSequence(contig_sequence,mrna); in GetCdsDnaSequence()
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H A D | asn1.cpp | 92 amap.EditedSequence(contig_seq, mrna_seq, true); in SModelData()
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H A D | chainer.cpp | 5043 amap.EditedSequence(contig, mrna); in SetConfirmedEnds() 6316 amap.EditedSequence(contig, mrna); in FindSelenoproteinsClipProteinsToStartStop() 6671 cdsmap.EditedSequence(seq, cds); in transform_align() 8092 m_edited_contig_map.EditedSequence(seq,editedseq); in SetGenomic()
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/gnomon/ |
H A D | gnomon_model.hpp | 654 …void EditedSequence(const Vec& original_sequence, Vec& edited_sequence, bool includeholes = false)…
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