| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/rmblastn/ |
| H A D | rmblastn_app.cpp | 101 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), in Run()
107 if (opt.GetUseIndex() && !m_CmdLineArgs->ExecuteRemotely()) { in Run()
127 m_CmdLineArgs->ExecuteRemotely(), in Run()
146 if (m_CmdLineArgs->ExecuteRemotely()) { in Run()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/app/blast/ |
| H A D | blastn_node.cpp | 104 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), db_adapter, scope); in Main()
130 if (opt.GetUseIndex() && !m_CmdLineArgs->ExecuteRemotely()) { in Main()
153 m_CmdLineArgs->ExecuteRemotely(), in Main()
194 if (m_CmdLineArgs->ExecuteRemotely()) { in Main()
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| H A D | tblastn_node.cpp | 107 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), db_adapter, scope); in Main()
171 m_CmdLineArgs->ExecuteRemotely(), in Main()
198 if (m_CmdLineArgs->ExecuteRemotely()) { in Main()
225 if (m_CmdLineArgs->ExecuteRemotely()) { in Main()
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| H A D | blastp_node.cpp | 103 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), db_adapter, scope); in Main()
143 m_CmdLineArgs->ExecuteRemotely(), in Main()
170 if (m_CmdLineArgs->ExecuteRemotely()) { in Main()
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| H A D | blastx_node.cpp | 104 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), db_adapter, scope); in Main()
147 m_CmdLineArgs->ExecuteRemotely(), in Main()
174 if (m_CmdLineArgs->ExecuteRemotely()) { in Main()
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| H A D | rpsblast_node.cpp | 105 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), in Main()
141 m_CmdLineArgs->ExecuteRemotely(), in Main()
164 if (m_CmdLineArgs->ExecuteRemotely()) in Main()
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| H A D | rpstblastn_node.cpp | 104 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), in Main()
140 m_CmdLineArgs->ExecuteRemotely(), in Main()
163 if (m_CmdLineArgs->ExecuteRemotely()) in Main()
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| H A D | tblastx_app.cpp | 118 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), in Run()
158 m_CmdLineArgs->ExecuteRemotely(), in Run()
185 if (m_CmdLineArgs->ExecuteRemotely()) { in Run()
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| H A D | tblastn_app.cpp | 135 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), in x_RunMTBySplitDB()
198 m_CmdLineArgs->ExecuteRemotely(), in x_RunMTBySplitDB()
225 if (m_CmdLineArgs->ExecuteRemotely()) { in x_RunMTBySplitDB()
252 if (m_CmdLineArgs->ExecuteRemotely()) { in x_RunMTBySplitDB()
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| H A D | blastn_app.cpp | 140 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), in x_RunMTBySplitDB()
164 if (opt.GetUseIndex() && !m_CmdLineArgs->ExecuteRemotely()) { in x_RunMTBySplitDB()
187 m_CmdLineArgs->ExecuteRemotely(), in x_RunMTBySplitDB()
232 if (m_CmdLineArgs->ExecuteRemotely()) { in x_RunMTBySplitDB()
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| H A D | deltablast_app.cpp | 217 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), in Run()
238 || m_CmdLineArgs->ExecuteRemotely()) { in Run()
276 m_CmdLineArgs->ExecuteRemotely(), in Run()
305 if (m_CmdLineArgs->ExecuteRemotely()) { in Run()
342 if (m_CmdLineArgs->ExecuteRemotely() in Run()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/blast/ |
| H A D | blastn_node.cpp | 104 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), db_adapter, scope); in Main()
130 if (opt.GetUseIndex() && !m_CmdLineArgs->ExecuteRemotely()) { in Main()
153 m_CmdLineArgs->ExecuteRemotely(), in Main()
194 if (m_CmdLineArgs->ExecuteRemotely()) { in Main()
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| H A D | tblastn_node.cpp | 107 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), db_adapter, scope); in Main()
171 m_CmdLineArgs->ExecuteRemotely(), in Main()
198 if (m_CmdLineArgs->ExecuteRemotely()) { in Main()
225 if (m_CmdLineArgs->ExecuteRemotely()) { in Main()
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| H A D | blastp_node.cpp | 103 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), db_adapter, scope); in Main()
143 m_CmdLineArgs->ExecuteRemotely(), in Main()
170 if (m_CmdLineArgs->ExecuteRemotely()) { in Main()
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| H A D | blastx_node.cpp | 104 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), db_adapter, scope); in Main()
147 m_CmdLineArgs->ExecuteRemotely(), in Main()
174 if (m_CmdLineArgs->ExecuteRemotely()) { in Main()
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| H A D | rpsblast_node.cpp | 105 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), in Main()
141 m_CmdLineArgs->ExecuteRemotely(), in Main()
164 if (m_CmdLineArgs->ExecuteRemotely()) in Main()
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| H A D | rpstblastn_node.cpp | 104 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), in Main()
140 m_CmdLineArgs->ExecuteRemotely(), in Main()
163 if (m_CmdLineArgs->ExecuteRemotely()) in Main()
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| H A D | tblastx_app.cpp | 118 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), in Run()
158 m_CmdLineArgs->ExecuteRemotely(), in Run()
185 if (m_CmdLineArgs->ExecuteRemotely()) { in Run()
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| H A D | blastn_app.cpp | 140 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), in x_RunMTBySplitDB()
164 if (opt.GetUseIndex() && !m_CmdLineArgs->ExecuteRemotely()) { in x_RunMTBySplitDB()
187 m_CmdLineArgs->ExecuteRemotely(), in x_RunMTBySplitDB()
232 if (m_CmdLineArgs->ExecuteRemotely()) { in x_RunMTBySplitDB()
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| H A D | tblastn_app.cpp | 135 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), in x_RunMTBySplitDB()
198 m_CmdLineArgs->ExecuteRemotely(), in x_RunMTBySplitDB()
225 if (m_CmdLineArgs->ExecuteRemotely()) { in x_RunMTBySplitDB()
252 if (m_CmdLineArgs->ExecuteRemotely()) { in x_RunMTBySplitDB()
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| H A D | deltablast_app.cpp | 217 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), in Run()
238 || m_CmdLineArgs->ExecuteRemotely()) { in Run()
276 m_CmdLineArgs->ExecuteRemotely(), in Run()
305 if (m_CmdLineArgs->ExecuteRemotely()) { in Run()
342 if (m_CmdLineArgs->ExecuteRemotely() in Run()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/igblast/ |
| H A D | igblastp_app.cpp | 128 InitializeSubject(db_args, opts_hndl, m_CmdLineArgs->ExecuteRemotely(), in Run()
130 if (m_CmdLineArgs->ExecuteRemotely()) { in Run()
189 if (m_CmdLineArgs->ExecuteRemotely() && db_is_remote) { in Run()
|
| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/blastinput/ |
| H A D | rpstblastn_args.cpp | 123 bool is_remote = (m_RemoteArgs.NotEmpty() && m_RemoteArgs->ExecuteRemotely()); in GetQueryBatchSize()
172 bool is_remote = (m_RemoteArgs.NotEmpty() && m_RemoteArgs->ExecuteRemotely()); in GetQueryBatchSize()
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| H A D | blastp_args.cpp | 130 bool is_remote = (m_RemoteArgs.NotEmpty() && m_RemoteArgs->ExecuteRemotely()); in GetQueryBatchSize()
166 bool is_remote = (m_RemoteArgs.NotEmpty() && m_RemoteArgs->ExecuteRemotely()); in GetQueryBatchSize()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/blastinput/ |
| H A D | rpstblastn_args.cpp | 123 bool is_remote = (m_RemoteArgs.NotEmpty() && m_RemoteArgs->ExecuteRemotely()); in GetQueryBatchSize()
172 bool is_remote = (m_RemoteArgs.NotEmpty() && m_RemoteArgs->ExecuteRemotely()); in GetQueryBatchSize()
|