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Searched refs:FEATDEF_variation (Results 1 – 15 of 15) sorted by relevance

/dports/biology/ncbi-toolkit/ncbi/object/
H A Dobjfdef.h285 #define FEATDEF_variation 65 macro
/dports/biology/ncbi-toolkit/ncbi/demo/
H A Dsnpscan.c252 if (sfp->idx.subtype != FEATDEF_variation && sfp->idx.subtype != FEATDEF_STS) return; in LookForGenes()
457 snp = SeqMgrGetNextFeature (bsp, NULL, 0, FEATDEF_variation, &sfpcontext); in ExamineBSPs()
468 snp = SeqMgrGetNextFeature (bsp, snp, 0, FEATDEF_variation, &sfpcontext); in ExamineBSPs()
H A Dsnpsynon.c534 featDefs [FEATDEF_variation] = TRUE; in VisitEachCDS()
/dports/biology/ncbi-toolkit/ncbi/api/
H A Dasn2gnb4.c1379 { FEATDEF_variation , FTQUAL_allele },
1380 { FEATDEF_variation , FTQUAL_compare },
1381 { FEATDEF_variation , FTQUAL_frequency },
1382 { FEATDEF_variation , FTQUAL_label },
1383 { FEATDEF_variation , FTQUAL_map },
1384 { FEATDEF_variation , FTQUAL_old_locus_tag },
1385 { FEATDEF_variation , FTQUAL_phenotype },
1386 { FEATDEF_variation , FTQUAL_product },
1387 { FEATDEF_variation , FTQUAL_replace },
1388 { FEATDEF_variation , FTQUAL_standard_name },
[all …]
H A Dddvcolor.c248 pClr[FEATDEF_variation]=DDV_GetColorRGB(210,154,14); in DDV_InitFeatureColors()
H A Dasn2ff1.c1561 sfp->idx.subtype = FEATDEF_variation; in ChangeObsoleteImpFeats()
H A Dvalid.c19813 …eftype == FEATDEF_misc_feature || featdeftype == FEATDEF_STS || featdeftype == FEATDEF_variation) { in ValidateBioseqContextIndexed()
19887 … } else if (featdeftype == FEATDEF_variation && ReplaceQualsDiffer (sfp->qual, last->qual)) { in ValidateBioseqContextIndexed()
28623 } else if (sfp->idx.subtype != FEATDEF_variation) { in ValidateSeqFeat()
29514 } else if (sfp->idx.subtype != FEATDEF_variation) { in ValidateSeqFeat()
H A Dasn2gnb3.c6934 if (awp->hideVariations && fcontext->featdeftype == FEATDEF_variation) return TRUE; in GetFeatsOnBioseq()
H A Dmacroapi.c1339 { Macro_feature_type_variation , FEATDEF_variation , "variation" } ,
8598 && sfp->idx.subtype != FEATDEF_variation) in GetQualFromFeatureAnyType()
8977 && sfp->idx.subtype != FEATDEF_variation) in RemoveQualFromFeatureAnyType()
9605 && sfp->idx.subtype != FEATDEF_variation) in SetQualOnFeatureAnyType()
H A Dsqnutil1.c13345 sfp->idx.subtype = FEATDEF_variation; in CleanUpSeqFeat()
H A Dsqnutil3.c2371 { FEATDEF_variation , "variation" },
/dports/biology/ncbi-toolkit/ncbi/desktop/
H A Dingengraph.c1713 pClr[FEATDEF_variation]=Ing_PutColor(210,154,14); in Ing_BuildColorTable()
1783 Ing_FreeColor(pClr[FEATDEF_variation]); in Ing_FreeColorTable()
H A Dudvgraph.c453 pClr[FEATDEF_variation]=GetColorRGB(210,154,14); in UDV_BuildFeatColorTable()
H A Dingenwin.c3422 return FEATDEF_variation; in Ing_GetFeatDefType()
/dports/biology/ncbi-toolkit/ncbi/sequin/
H A Dsequin9.c6691 if (sfp == NULL || userdata == NULL || sfp->idx.subtype != FEATDEF_variation) in VariationAlignmentCallback()