| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/sbml/packages/fbc/sbml/ |
| H A D | FluxBound.cpp | 82 FluxBound::FluxBound(FbcPkgNamespaces* fbcns) in FluxBound() function in FluxBound
105 FluxBound::FluxBound(const FluxBound& source) : SBase(source) in FluxBound() function in FluxBound
121 FluxBound& FluxBound::operator=(const FluxBound& source) in operator =()
144 FluxBound::~FluxBound () in ~FluxBound()
1004 FluxBound*
1084 FluxBound *
1092 const FluxBound *
1100 FluxBound*
1109 const FluxBound*
1120 FluxBound*
[all …]
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| H A D | FluxBound.h | 136 class LIBSBML_EXTERN FluxBound : public SBase
179 FluxBound(FbcPkgNamespaces* fbcns);
187 FluxBound(const FluxBound& source);
196 FluxBound& operator=(const FluxBound& source);
202 virtual ~FluxBound ();
432 virtual FluxBound* clone () const;
856 virtual FluxBound* get(unsigned int n);
869 virtual const FluxBound * get(unsigned int n) const;
886 virtual FluxBound* get (const std::string& sid);
916 virtual FluxBound* remove (unsigned int n);
[all …]
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| H A D | Makefile.in | 61 FluxBound.h \
76 FluxBound.cpp \
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/sbml/packages/fbc/extension/ |
| H A D | FbcModelPlugin.h | 404 const FluxBound* getFluxBound (unsigned int n) const;
418 FluxBound* getFluxBound (unsigned int n);
435 FluxBound* getFluxBound (const std::string& sid);
452 const FluxBound* getFluxBound (const std::string& sid) const;
486 int addFluxBound (const FluxBound* bound);
497 FluxBound* createFluxBound();
515 FluxBound* removeFluxBound (unsigned int n);
533 FluxBound* removeFluxBound (const std::string& sid);
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| H A D | FbcModelPlugin.cpp | 725 const FluxBound*
741 FluxBound*
744 return static_cast<FluxBound*>(mBounds.get(n)); in getFluxBound()
760 FluxBound*
763 return static_cast<FluxBound*>(mBounds.get(sid)); in getFluxBound()
779 const FluxBound*
831 FluxBound*
834 FluxBound* bound = NULL; in createFluxBound()
839 bound = new FluxBound(fbcns); in createFluxBound()
872 FluxBound*
[all …]
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/sbml/packages/fbc/validator/constraints/ |
| H A D | FluxBoundsConsistent.cpp | 96 FluxBound * fb = object.get(n); in checkBounds()
146 FluxBoundsConsistent::logInconsistency (std::string name, const FluxBound& object ) in logInconsistency()
150 msg += static_cast<FluxBound>(object).getReaction(); in logInconsistency()
152 msg += static_cast<FluxBound>(object).getOperation(); in logInconsistency()
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| H A D | FluxBoundsConsistent.h | 70 void logInconsistency (const std::string name, const FluxBound& object);
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/bindings/csharp/ |
| H A D | local-packages-fbc.i | 119 return new FluxBound(cPtr, owner); in DowncastSBase()
161 COVARIANT_RTYPE_CLONE(FluxBound)
179 COVARIANT_RTYPE_LISTOF_GET_REMOVE(FluxBound)
186 SBMLCONSTRUCTOR_EXCEPTION(FluxBound)
203 COVARIANT_GETID(FluxBound)
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/bindings/java/ |
| H A D | local-packages-fbc.i | 128 return new FluxBound(cPtr, owner); in DowncastSBase()
166 COVARIANT_RTYPE_CLONE(FluxBound)
186 COVARIANT_RTYPE_LISTOF_GET_REMOVE(FluxBound)
189 SBMLCONSTRUCTOR_EXCEPTION(FluxBound)
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/sbml/packages/fbc/validator/ |
| H A D | FbcValidator.cpp | 150 ConstraintSet<FluxBound> mFluxBound;
212 if (dynamic_cast< TConstraint<FluxBound>* >(c) != NULL) in add()
214 mFluxBound.add( static_cast< TConstraint<FluxBound>* >(c) ); in add()
317 bool visit (const FluxBound &x) in visit()
427 return visit((const FluxBound&)x); in visit()
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/sbml/packages/fbc/util/ |
| H A D | FbcV2ToV1Converter.cpp | 132 FluxBound* fb = mplug->createFluxBound(); in convertReactionsToV1()
144 FluxBound* fb = mplug->createFluxBound(); in convertReactionsToV1()
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| H A D | CobraToFbcConverter.cpp | 260 FluxBound* fluxBound = fbcPlugin->createFluxBound(); in convert()
269 FluxBound *fluxBound = fbcPlugin->createFluxBound(); in convert()
276 FluxBound *fluxBound = fbcPlugin->createFluxBound(); in convert()
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| H A D | FbcToCobraConverter.cpp | 192 void updateKineticLawFromBound(Reaction* reaction, FluxBound* current) in updateKineticLawFromBound()
349 FluxBound *current = plugin->getFluxBound(i); in convert()
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| H A D | FbcV1ToV2Converter.cpp | 151 FluxBound* current = mplug->getFluxBound(i); in updateFluxBounds()
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/sbml/packages/fbc/extension/test/ |
| H A D | TestWriteFbcExtension.cpp | 104 FluxBound* bound = mplugin->createFluxBound(); in START_TEST()
204 FluxBound* bound = mplugin->createFluxBound(); in START_TEST()
334 FluxBound* bound = mplugin->createFluxBound(); in START_TEST()
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| H A D | TestReadFbcExtension.cpp | 72 FluxBound* bound = mplugin->getFluxBound(0); in START_TEST()
124 FluxBound* bound = mplugin->getFluxBound(0); in START_TEST()
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/sbml/packages/fbc/common/ |
| H A D | fbcfwd.h | 57 typedef CLASS_OR_STRUCT FluxBound FluxBound_t;
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/bindings/javascript/ |
| H A D | local-fbc.i | 5 SBMLCONSTRUCTOR_EXCEPTION(FluxBound)
|
| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/bindings/perl/ |
| H A D | local-fbc.i | 5 SBMLCONSTRUCTOR_EXCEPTION(FluxBound)
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/bindings/php/ |
| H A D | local-fbc.i | 5 SBMLCONSTRUCTOR_EXCEPTION(FluxBound)
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/bindings/python/ |
| H A D | local-fbc.i | 5 SBMLCONSTRUCTOR_EXCEPTION(FluxBound)
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/bindings/r/ |
| H A D | local-fbc.i | 5 SBMLCONSTRUCTOR_EXCEPTION(FluxBound)
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/bindings/ruby/ |
| H A D | local-fbc.i | 5 SBMLCONSTRUCTOR_EXCEPTION(FluxBound)
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/src/bindings/swig/ |
| H A D | fbc-package.i | 66 %include <sbml/packages/fbc/sbml/FluxBound.h>
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| /dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/examples/c++/fbc/ |
| H A D | fbc_example1.cpp | 291 FluxBound* bound= mplugin->createFluxBound(); in main()
|