/dports/math/deal.ii/dealii-803d21ff957e349b3799cd3ef2c840bc78734305/source/lac/ |
H A D | full_matrix.inst.in | 85 template FullMatrix<S1> &FullMatrix<S1>::operator=( 117 template void FullMatrix<S1>::mmult<S2>(FullMatrix<S2> &, 120 template void FullMatrix<S1>::Tmmult<S2>(FullMatrix<S2> &, 123 template void FullMatrix<S1>::mTmult<S2>(FullMatrix<S2> &, 126 template void FullMatrix<S1>::TmTmult<S2>(FullMatrix<S2> &, 129 template void FullMatrix<S1>::invert<S2>(const FullMatrix<S2> &); 131 template void FullMatrix<S1>::left_invert<S2>(const FullMatrix<S2> &); 139 template void FullMatrix<S1>::cholesky<S2>(const FullMatrix<S2> &); 237 template void FullMatrix<S1>::mmult<S2>(FullMatrix<S2> &, 240 template void FullMatrix<S1>::Tmmult<S2>(FullMatrix<S2> &, [all …]
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H A D | full_matrix.cc | 29 template class FullMatrix<std::complex<double>>; variable 34 template class FullMatrix<long double>; variable 36 FullMatrix<long double>::invert<long double>(const FullMatrix<long double> &); 38 FullMatrix<long double>::mmult<long double>(FullMatrix<long double> &, 42 FullMatrix<long double>::Tmmult<long double>(FullMatrix<long double> &, 46 FullMatrix<long double>::mTmult<long double>(FullMatrix<long double> &, 50 FullMatrix<long double>::TmTmult<long double>(FullMatrix<long double> &, 54 FullMatrix<long double>::vmult<long double>(Vector<long double> &, 58 FullMatrix<long double>::Tvmult<long double>(Vector<long double> &, 62 FullMatrix<long double>::add<long double>(const long double, [all …]
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H A D | petsc_full_matrix.cc | 27 FullMatrix::FullMatrix() in FullMatrix() function in PETScWrappers::FullMatrix 33 FullMatrix::FullMatrix(const size_type m, const size_type n) in FullMatrix() function in PETScWrappers::FullMatrix 39 FullMatrix::reinit(const size_type m, const size_type n) in reinit() 50 FullMatrix::do_reinit(const size_type m, const size_type n) in do_reinit() 61 FullMatrix::get_mpi_communicator() const in get_mpi_communicator()
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H A D | affine_constraints.inst.in | 86 const FullMatrix<S> &, 95 const FullMatrix<S> &, 105 const FullMatrix<S> &, 114 const FullMatrix<S> &, 120 const FullMatrix<S> &, 138 const FullMatrix<S> &, 155 const FullMatrix<S> &, 218 const FullMatrix<S> &, 225 const FullMatrix<S> &, 238 const FullMatrix<S> &, [all …]
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H A D | affine_constraints.cc | 44 const FullMatrix<VectorType::value_type> &) const; \ 52 const FullMatrix<VectorType::value_type> &, \ 58 const FullMatrix<MatrixType::value_type> &, \ 69 const FullMatrix<MatrixType::value_type> &, \ 80 MatrixType>(const FullMatrix<MatrixType::value_type> &, \ 86 MatrixType>(const FullMatrix<MatrixType::value_type> &, \
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/dports/math/hmat-oss/hmat-oss-1.7.1/src/ |
H A D | full_matrix.cpp | 67 FullMatrix<T>::FullMatrix(T* _m, const IndexSet* _rows, const IndexSet* _cols, int _lda) in FullMatrix() function in hmat::FullMatrix 75 FullMatrix<T>::FullMatrix(ScalarArray<T> *s, const IndexSet* _rows, const IndexSet* _cols) in FullMatrix() function in hmat::FullMatrix 86 FullMatrix<T>::FullMatrix(const IndexSet* _rows, const IndexSet* _cols, bool zeroinit) in FullMatrix() function in hmat::FullMatrix 93 template<typename T> FullMatrix<T>::~FullMatrix() { in ~FullMatrix() 131 template<typename T> FullMatrix<T>* FullMatrix<T>::copy(FullMatrix<T>* result) const { in copy() 149 template<typename T> FullMatrix<T>* FullMatrix<T>::copyAndTranspose() const { in copyAndTranspose() 152 FullMatrix<T>* result = new FullMatrix<T>(cols_, rows_); in copyAndTranspose() 157 template<typename T> const FullMatrix<T>* FullMatrix<T>::subset(const IndexSet* subRows, in subset() 171 const FullMatrix<T>* a, const FullMatrix<T>* b, in gemm() 276 void FullMatrix<T>::copyMatrixAtOffset(const FullMatrix<T>* a, in copyMatrixAtOffset() [all …]
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H A D | full_matrix.hpp | 44 template<typename T> class FullMatrix { class 53 FullMatrix(const FullMatrix<T>& o); 76 FullMatrix(T* _m, const IndexSet* _rows, const IndexSet* _cols, int _lda=-1); 85 FullMatrix(ScalarArray<T> *s, const IndexSet* _rows, const IndexSet* _cols); 93 FullMatrix(const IndexSet* _rows, const IndexSet* _cols, bool zeroinit=true); 94 ~FullMatrix(); 129 FullMatrix<T>* copy(FullMatrix<T>* result = NULL) const; 132 FullMatrix<T>* copyAndTranspose() const; 154 void gemm(char transA, char transB, T alpha, const FullMatrix<T>* a, 155 const FullMatrix<T>* b, T beta); [all …]
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H A D | fromdouble.cpp | 57 FullMatrix<D_t>* fromDoubleFull(FullMatrix<D_t>* f) { in fromDoubleFull() 61 FullMatrix<Z_t>* fromDoubleFull(FullMatrix<Z_t>* f) { in fromDoubleFull() 66 FullMatrix<T>* fromDoubleFull(FullMatrix<typename Types<T>::dp>* f) { in fromDoubleFull() 69 FullMatrix<T>* result = new FullMatrix<T>(f->rows_, f->cols_); in fromDoubleFull() 78 template FullMatrix<S_t>* fromDoubleFull(FullMatrix<Types<S_t>::dp>* f); 79 template FullMatrix<C_t>* fromDoubleFull(FullMatrix<Types<C_t>::dp>* f);
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H A D | h_matrix.hpp | 51 template<typename T> class FullMatrix; 134 FullMatrix<T> * full_; 160 void axpy(T alpha, const FullMatrix<T>* b); 258 …void gemv(char trans, T alpha, const FullMatrix<T>* x, T beta, FullMatrix<T>* y, Side side = Side:… 426 FullMatrix<T>* getFullMatrix() const { in getFullMatrix() 505 void solveDiagonal(FullMatrix<T>* b) const; 511 void solve(FullMatrix<T>* b) const; 528 void solveLdlt(FullMatrix<T>* b) const ; 534 void solveLlt(FullMatrix<T>* b) const ; 658 FullMatrix<T> * full() const { in full() [all …]
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H A D | assembly.hpp | 34 template<typename T> class FullMatrix; 64 FullMatrix<T> * & fullMatrix, RkMatrix<T> * & rkMatrix, 79 FullMatrix<T> * & fullMatrix, RkMatrix<T> * & rkMatrix, 91 virtual FullMatrix<typename Types<T>::dp>* assemble(const ClusterData* rows, 180 virtual FullMatrix<typename Types<T>::dp>* assemble(const ClusterData* rows, 213 FullMatrix<typename Types<T>::dp>* assemble(const ClusterData* rows,
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/dports/math/deal.ii/dealii-803d21ff957e349b3799cd3ef2c840bc78734305/include/deal.II/lac/ |
H A D | full_matrix.h | 171 FullMatrix<number> & 181 FullMatrix<number> & 192 FullMatrix<number> & 200 FullMatrix<number> & 555 FullMatrix & 561 FullMatrix & 585 const FullMatrix<number2> &A, 600 const FullMatrix<number2> &A, 1111 FullMatrix<number>::m() const in m() 1120 FullMatrix<number>::n() const in n() [all …]
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H A D | full_matrix.templates.h | 46 FullMatrix<number>::FullMatrix(const size_type n) in FullMatrix() function 58 FullMatrix<number>::FullMatrix(const size_type m, in FullMatrix() function 69 FullMatrix<number>::FullMatrix(const IdentityMatrix &id) in FullMatrix() function 81 FullMatrix<number>::operator=(const FullMatrix<number2> &M) 307 FullMatrix<number>::fill(const FullMatrix<number2> &src, in fill() 507 FullMatrix<number>::mmult(FullMatrix<number2> & dst, in mmult() 589 FullMatrix<number>::Tmmult(FullMatrix<number2> & dst, in Tmmult() 694 FullMatrix<number>::mTmult(FullMatrix<number2> & dst, in mTmult() 1122 FullMatrix<number>::add(const FullMatrix<number2> &src, in add() 1149 FullMatrix<number>::Tadd(const FullMatrix<number2> &src, in Tadd() [all …]
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H A D | precondition_block_base.h | 37 class FullMatrix; variable 166 FullMatrix<number> & 184 const FullMatrix<number> & 202 FullMatrix<number> & 208 const FullMatrix<number> & 380 std::vector<FullMatrix<number>> tmp(n, FullMatrix<number>(b)); in reinit() 388 std::vector<FullMatrix<number>> tmp(n, FullMatrix<number>(b)); in reinit() 475 inline const FullMatrix<number> & 511 inline const FullMatrix<number> & 525 inline FullMatrix<number> & [all …]
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/dports/science/ergo/ergo-3.8/source/dft/ |
H A D | xc_matrix.cc | 268 Dft::FullMatrix res(nbast); in dft_get_xc() 269 Dft::FullMatrix density(dmat, nbast); in dft_get_xc() 287 &xcCallbackLdaR<Dft::FullMatrix,XCDistributorLda<Dft::FullMatrix> >; in dft_get_xc() 291 &xcCallbackGgaR<Dft::FullMatrix,XCDistributorGga<Dft::FullMatrix> >; in dft_get_xc() 439 Dft::FullMatrix *exca, *excb; 454 const Dft::FullMatrix *dmat[2]; in dft_get_uxc() 457 Dft::FullMatrix mata(nbast), matb(nbast); in dft_get_uxc() 458 Dft::FullMatrix densa(dmata, nbast); in dft_get_uxc() 459 Dft::FullMatrix densb(dmatb, nbast); in dft_get_uxc() 470 = xcCallbackLdaU<Dft::FullMatrix,XCDistributorLda<Dft::FullMatrix> >; in dft_get_uxc() [all …]
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H A D | grid_matrix.h | 53 class FullMatrix { 58 explicit FullMatrix(int nbast_) in FullMatrix() function 63 FullMatrix(ergo_real *m, int nbast_) in FullMatrix() function 68 FullMatrix(const ergo_real *m, int nbast_) in FullMatrix() function 73 ~FullMatrix() { if (owned && mat) delete []mat; } in ~FullMatrix()
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/dports/math/deal.ii/dealii-803d21ff957e349b3799cd3ef2c840bc78734305/include/deal.II/fe/ |
H A D | fe_q_hierarchical.h | 588 FullMatrix<double> & matrix) const override; 593 virtual const FullMatrix<double> & 652 FullMatrix<double> & matrix, 670 FullMatrix<double> & matrix, 751 build_dofs_cell(std::vector<FullMatrix<double>> &dofs_cell, 752 std::vector<FullMatrix<double>> &dofs_subcell) const; 759 initialize_constraints(const std::vector<FullMatrix<double>> &dofs_subcell); 766 const std::vector<FullMatrix<double>> &dofs_cell, 767 const std::vector<FullMatrix<double>> &dofs_subcell);
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H A D | fe_bernstein.h | 81 FullMatrix<double> &matrix) const override; 90 virtual const FullMatrix<double> & 103 virtual const FullMatrix<double> & 120 FullMatrix<double> & matrix, 136 FullMatrix<double> & matrix,
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H A D | fe_q_base.h | 61 FullMatrix<double> &matrix) const override; 75 FullMatrix<double> & matrix, 91 FullMatrix<double> & matrix, 124 virtual const FullMatrix<double> & 156 virtual const FullMatrix<double> &
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H A D | fe_tools.h | 45 class FullMatrix; variable 196 FullMatrix<number> &interpolation_matrix); 239 FullMatrix<number> & matrix); 310 FullMatrix<double> 355 std::vector<std::vector<FullMatrix<number>>> &matrices, 424 std::vector<std::vector<FullMatrix<number>>> &matrices, 518 FullMatrix<double> & X); 532 FullMatrix<double> & I_q); 550 const FullMatrix<double> & projection_matrix, 562 const FullMatrix<double> & projection_matrix, [all …]
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/dports/biology/mothur/mothur-1.46.1/source/datastructures/ |
H A D | fullmatrix.cpp | 14 FullMatrix::FullMatrix(ifstream& filehandle, GroupMap* g, bool s) : groupmap(g), sim(s) { in FullMatrix() function in FullMatrix 73 int FullMatrix::readSquareMatrix(ifstream& filehandle) { in readSquareMatrix() 113 int FullMatrix::readLTMatrix(ifstream& filehandle) { in readLTMatrix() 156 void FullMatrix::sortGroups(int low, int high){ in sortGroups() 198 void FullMatrix::swapRows(int i, int j) { in swapRows() 236 float FullMatrix::get(int i, int j){ return matrix[i][j]; } in get() 240 vector<string> FullMatrix::getGroups(){ return groups; } in getGroups() 244 vector<int> FullMatrix::getSizes(){ return sizes; } in getSizes() 248 int FullMatrix::getNumGroups(){ return groups.size(); } in getNumGroups() 252 int FullMatrix::getNumSeqs(){ return numSeqs; } in getNumSeqs() [all …]
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/dports/math/deal.ii/dealii-803d21ff957e349b3799cd3ef2c840bc78734305/source/fe/ |
H A D | fe_tools.inst.in | 155 FullMatrix<double> &); 166 FullMatrix<double> &); 173 FullMatrix<double> &); 192 FullMatrix<double> &); 197 FullMatrix<double> &); 202 FullMatrix<float> &); 207 FullMatrix<float> &); 212 FullMatrix<float> &); 218 FullMatrix<double> &); 223 FullMatrix<float> &); [all …]
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/dports/math/deal.ii/dealii-803d21ff957e349b3799cd3ef2c840bc78734305/include/deal.II/physics/ |
H A D | notation.h | 399 FullMatrix<Number> 409 FullMatrix<Number> 419 FullMatrix<Number> 429 FullMatrix<Number> 443 FullMatrix<Number> 482 FullMatrix<Number> 493 FullMatrix<Number> 505 FullMatrix<Number> 892 FullMatrix<Number> 902 FullMatrix<Number> [all …]
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/dports/math/deal.ii/dealii-803d21ff957e349b3799cd3ef2c840bc78734305/include/deal.II/differentiation/ad/ |
H A D | ad_drivers.h | 446 FullMatrix<ScalarType> & hessian) const; 495 FullMatrix<ScalarType> & jacobian) const; 629 FullMatrix<ScalarType> & hessian) const; 859 FullMatrix<scalar_type> & hessian) const; 878 FullMatrix<scalar_type> & jacobian) const; 1055 FullMatrix<scalar_type> &) const; 1074 FullMatrix<scalar_type> &) const; 1178 FullMatrix<scalar_type> & hessian) const; 1197 FullMatrix<scalar_type> & jacobian) const; 1279 FullMatrix<ScalarType> & hessian) const; [all …]
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/dports/science/votca/votca-2021.2-18560-gfbe18d971/xtp/src/tests/ |
H A D | test_threecenter_dft.cc | 56 bool check_three1 = Ref0.isApprox(threec[0].FullMatrix(), 0.00001); in BOOST_AUTO_TEST_CASE() 59 std::cout << threec[0].FullMatrix() << std::endl; in BOOST_AUTO_TEST_CASE() 64 bool check_three2 = Ref4.isApprox(threec[4].FullMatrix(), 0.00001); in BOOST_AUTO_TEST_CASE() 67 std::cout << threec[4].FullMatrix() << std::endl; in BOOST_AUTO_TEST_CASE()
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/dports/science/votca/votca-2021.2-18560-gfbe18d971/xtp/xtp-2a31d70/src/tests/ |
H A D | test_threecenter_dft.cc | 56 bool check_three1 = Ref0.isApprox(threec[0].FullMatrix(), 0.00001); in BOOST_AUTO_TEST_CASE() 59 std::cout << threec[0].FullMatrix() << std::endl; in BOOST_AUTO_TEST_CASE() 64 bool check_three2 = Ref4.isApprox(threec[4].FullMatrix(), 0.00001); in BOOST_AUTO_TEST_CASE() 67 std::cout << threec[4].FullMatrix() << std::endl; in BOOST_AUTO_TEST_CASE()
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