Searched refs:GCParseVec (Results 1 – 7 of 7) sorted by relevance
35 friend class GCParseVec; variable96 class GCParseVec : public std::vector<GCParse*>99 bool MungeParses(GCParseVec::iterator,GCParseVec::iterator);102 GCParseVec();103 virtual ~GCParseVec();
352 GCParseVec::GCParseVec() in GCParseVec() function in GCParseVec358 GCParseVec::~GCParseVec() in ~GCParseVec()363 GCParseVec::NukeContents() in NukeContents()372 GCParseVec::MungeParses(GCParseVec::iterator i1, GCParseVec::iterator i2) in MungeParses()387 GCParseVec::MungeParses() in MungeParses()
196 GCParseVec199 GCParseVec goodParses; in GoodPhylipParses()241 GCParseVec244 GCParseVec goodParses; in GoodMigrateParses()286 GCParseVec *290 GCParseVec * parseVecP = new GCParseVec(); in AllParsesForFile()292 GCParseVec phyParses = GoodPhylipParses(file); in AllParsesForFile()295 GCParseVec migParsesKallele = GoodMigrateParses(file,gcdata::allelicDataTypes()); in AllParsesForFile()298 GCParseVec migParsesNuc = GoodMigrateParses(file,gcdata::nucDataTypes()); in AllParsesForFile()
33 GCParseVec * m_parses; // we own this39 void SetParses(GCParseVec * parses);
54 GCParseVec * AllParsesForFile(GCFile &);55 void MungeParses(GCParseVec &);56 GCParseVec GoodPhylipParses(GCFile & file);57 GCParseVec GoodMigrateParses(GCFile & file, gcGeneralDataType);
73 GCFile::SetParses(GCParseVec * parses) in SetParses()116 for(GCParseVec::const_iterator i = m_parses->begin(); i != m_parses->end(); i++) in DebugDump()
47 GCParseVec * parseVecP = new GCParseVec(); in AddDataFile()81 GCParseVec * parseVecP = AllParsesForFile(*file); in AddDataFile()