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Searched refs:GFILTERs (Results 1 – 2 of 2) sorted by relevance

/dports/biology/vcftools/vcftools-0.1.16/src/cpp/
H A Dbcf_entry.cpp188 vector<string> GFILTERs; in filter_genotypes_by_filter_status() local
195 get_indv_GFILTER_vector(ui, GFILTERs); in filter_genotypes_by_filter_status()
199 if (!GFILTERs.empty()) in filter_genotypes_by_filter_status()
200 if ((GFILTERs[0] != "PASS") && (GFILTERs[0] != ".")) in filter_genotypes_by_filter_status()
205 for (unsigned int uj=0; uj<GFILTERs.size(); uj++) in filter_genotypes_by_filter_status()
206 if (filter_flags_to_remove.find(GFILTERs[uj]) != filter_flags_to_remove.end()) in filter_genotypes_by_filter_status()
H A Dvcf_entry.cpp585 vector<string> GFILTERs; in filter_genotypes_by_filter_status() local
592 get_indv_GFILTER_vector(ui, GFILTERs); in filter_genotypes_by_filter_status()
596 if (!GFILTERs.empty()) in filter_genotypes_by_filter_status()
597 if ((GFILTERs[0] != "PASS") && (GFILTERs[0] != ".")) in filter_genotypes_by_filter_status()
602 for (unsigned int uj=0; uj<GFILTERs.size(); uj++) in filter_genotypes_by_filter_status()
603 if (filter_flags_to_remove.find(GFILTERs[uj]) != filter_flags_to_remove.end()) in filter_genotypes_by_filter_status()