| /dports/biology/sra-tools/sra-tools-2.11.0/ngs/ngs-java/ngs/itf/ |
| H A D | ReadCollectionItf.java | 202 long ref = this . GetAlignments ( self, categories ); in getAlignments()
386 private native long GetAlignments ( long self, int categories ) in GetAlignments() method in ReadCollectionItf
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| H A D | ReferenceItf.java | 186 long ref = this . GetAlignments ( self, categories ); in getAlignments()
369 private native long GetAlignments ( long self, int categories ) in GetAlignments() method in ReferenceItf
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| /dports/biology/ncbi-vdb/ngs-2.11.0/ngs-java/ngs/itf/ |
| H A D | ReadCollectionItf.java | 202 long ref = this . GetAlignments ( self, categories ); in getAlignments()
386 private native long GetAlignments ( long self, int categories ) in GetAlignments() method in ReadCollectionItf
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| H A D | ReferenceItf.java | 186 long ref = this . GetAlignments ( self, categories ); in getAlignments()
369 private native long GetAlignments ( long self, int categories ) in GetAlignments() method in ReferenceItf
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| /dports/biology/ngs-sdk/ngs-2.11.1/ngs-java/ngs/itf/ |
| H A D | ReadCollectionItf.java | 202 long ref = this . GetAlignments ( self, categories ); in getAlignments()
386 private native long GetAlignments ( long self, int categories ) in GetAlignments() method in ReadCollectionItf
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| H A D | ReferenceItf.java | 186 long ref = this . GetAlignments ( self, categories ); in getAlignments()
369 private native long GetAlignments ( long self, int categories ) in GetAlignments() method in ReferenceItf
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| /dports/science/libssm/ssm-1.4.0/ssm/ |
| H A D | ssm_align.h | 198 void GetAlignments ( mmdb::pstr & algn1, mmdb::pstr & algn2 );
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/structure/cd_utils/ |
| H A D | cuCdUpdater.hpp | 145 const CRef<CSeq_align_set>& GetAlignments() const {return m_hits;} in GetAlignments() function in CDUpdater
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/unit_tests/api/ |
| H A D | remote_blast_unit_test.cpp | 581 CRef<CSeq_align_set> sas = rmt_blaster.GetAlignments(); in BOOST_AUTO_TEST_CASE()
595 CRef<CSeq_align_set> sas = rmt_blaster.GetAlignments(); in BOOST_AUTO_TEST_CASE()
609 CRef<CSeq_align_set> sas = rmt_blaster.GetAlignments(); in BOOST_AUTO_TEST_CASE()
624 CRef<CSeq_align_set> sas = rmt_blaster.GetAlignments(); in BOOST_AUTO_TEST_CASE()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/unit_tests/api/ |
| H A D | remote_blast_unit_test.cpp | 581 CRef<CSeq_align_set> sas = rmt_blaster.GetAlignments(); in BOOST_AUTO_TEST_CASE()
595 CRef<CSeq_align_set> sas = rmt_blaster.GetAlignments(); in BOOST_AUTO_TEST_CASE()
609 CRef<CSeq_align_set> sas = rmt_blaster.GetAlignments(); in BOOST_AUTO_TEST_CASE()
624 CRef<CSeq_align_set> sas = rmt_blaster.GetAlignments(); in BOOST_AUTO_TEST_CASE()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/algo/blast/api/ |
| H A D | remote_blast.hpp | 318 CRef<objects::CSeq_align_set> GetAlignments(void);
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/align_format/unit_test/ |
| H A D | tabularinof_unit_test.cpp | 344 const CSeq_align_set::Tdata& seqalign_list = ba->GetResults().GetAlignments().Get(); in BOOST_AUTO_TEST_CASE()
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/blast/api/ |
| H A D | remote_blast.hpp | 318 CRef<objects::CSeq_align_set> GetAlignments(void);
|
| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/align_format/unit_test/ |
| H A D | tabularinof_unit_test.cpp | 344 const CSeq_align_set::Tdata& seqalign_list = ba->GetResults().GetAlignments().Get(); in BOOST_AUTO_TEST_CASE()
|
| /dports/databases/tile38/tile38-1.12.0/vendor/google.golang.org/genproto/googleapis/genomics/v1/ |
| H A D | reads.pb.go | 604 func (m *SearchReadsResponse) GetAlignments() []*Read { func
722 func (m *StreamReadsResponse) GetAlignments() []*Read { func
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| /dports/databases/prometheus-postgresql-adapter/prometheus-postgresql-adapter-0.6.0/vendor/google.golang.org/genproto/googleapis/genomics/v1/ |
| H A D | reads.pb.go | 911 func (m *SearchReadsResponse) GetAlignments() []*Read { func
1075 func (m *StreamReadsResponse) GetAlignments() []*Read { func
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| /dports/net/grpcox/grpcox-1.0.0/vendor/google.golang.org/genproto/googleapis/genomics/v1/ |
| H A D | reads.pb.go | 896 func (m *SearchReadsResponse) GetAlignments() []*Read { func
1058 func (m *StreamReadsResponse) GetAlignments() []*Read { func
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| /dports/net/grpcui/grpcui-1.1.0/vendor/google.golang.org/genproto/googleapis/genomics/v1/ |
| H A D | reads.pb.go | 913 func (m *SearchReadsResponse) GetAlignments() []*Read { func
1077 func (m *StreamReadsResponse) GetAlignments() []*Read { func
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| /dports/security/lego/lego-4.5.3/vendor/google.golang.org/genproto/googleapis/genomics/v1/ |
| H A D | reads.pb.go | 913 func (m *SearchReadsResponse) GetAlignments() []*Read { func
1077 func (m *StreamReadsResponse) GetAlignments() []*Read { func
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| /dports/net/evans/evans-0.9.1/vendor/google.golang.org/genproto/googleapis/genomics/v1/ |
| H A D | reads.pb.go | 913 func (m *SearchReadsResponse) GetAlignments() []*Read { func
1077 func (m *StreamReadsResponse) GetAlignments() []*Read { func
|
| /dports/devel/goprotobuf/protobuf-1.1.0/src/google.golang.org/genproto/googleapis/genomics/v1/ |
| H A D | reads.pb.go | 896 func (m *SearchReadsResponse) GetAlignments() []*Read { func
1058 func (m *StreamReadsResponse) GetAlignments() []*Read { func
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| /dports/www/fabio/fabio-1.5.14/vendor/google.golang.org/genproto/go-genproto-082222b4a5c5/googleapis/genomics/v1/ |
| H A D | reads.pb.go | 896 func (m *SearchReadsResponse) GetAlignments() []*Read { func
1058 func (m *StreamReadsResponse) GetAlignments() []*Read { func
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| /dports/www/pomerium/pomerium-0.8.3/vendor/google.golang.org/genproto/googleapis/genomics/v1/ |
| H A D | reads.pb.go | 913 func (m *SearchReadsResponse) GetAlignments() []*Read { func
1077 func (m *StreamReadsResponse) GetAlignments() []*Read { func
|
| /dports/audio/murmur-cli/murmur-cli-8f83169/vendor/google.golang.org/genproto/googleapis/genomics/v1/ |
| H A D | reads.pb.go | 911 func (m *SearchReadsResponse) GetAlignments() []*Read { func
1075 func (m *StreamReadsResponse) GetAlignments() []*Read { func
|
| /dports/databases/cayley/cayley-0.7.5-2-gcf576ba/vendor/google.golang.org/genproto/googleapis/genomics/v1/ |
| H A D | reads.pb.go | 911 func (m *SearchReadsResponse) GetAlignments() []*Read { func
1075 func (m *StreamReadsResponse) GetAlignments() []*Read { func
|