Searched refs:GoodEnoughToBeAnnotation (Results 1 – 3 of 3) sorted by relevance
170 …f ((it->Type() & (CGeneModel::eWall | CGeneModel::eNested))!=0 || it->GoodEnoughToBeAnnotation()) { in TryToEliminateAlignmentsFromTail()269 … if ((it->Type() & (CGeneModel::eWall | CGeneModel::eNested))==0 && it->GoodEnoughToBeAnnotation()) in Predict()400 if (ir->RankInGene() == 1 && !ir->GoodEnoughToBeAnnotation()) { in FindPartials()499 if(!nested_modeli->GoodEnoughToBeAnnotation()) { in Predict()518 if(igg == ig || !other_gene.front()->GoodEnoughToBeAnnotation()) in Predict()568 if(!(*im)->GoodEnoughToBeAnnotation()) { in Predict()644 … if(it->RankInGene() != 1 || it->GoodEnoughToBeAnnotation() || it->Type()&CGeneModel::eNested) in Predict()647 …if(it_prev->RankInGene() != 1 || it_prev->GoodEnoughToBeAnnotation() || it_prev->Type()&CGeneModel… in Predict()
696 …gene_good_enough_to_be_annotation = allow_partialalts || gene.front()->GoodEnoughToBeAnnotation(); in CheckCompatibility()697 bool algn_good_enough_to_be_annotation = allow_partialalts || algn.GoodEnoughToBeAnnotation(); in CheckCompatibility()953 …ed_in.empty() && (allow_partialalts || included_in.front()->front()->GoodEnoughToBeAnnotation())) { in FindAltsForGeneSeeds()1061 if(!allow_partialalts && !itl->front()->GoodEnoughToBeAnnotation()) { in PlaceAllYouCan()
508 bool GoodEnoughToBeAnnotation() const in GoodEnoughToBeAnnotation() function in CGeneModel