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Searched refs:IsMappedToGenome (Results 1 – 7 of 7) sorted by relevance

/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/gnomon/
H A Dgnomon_objmgr.cpp481 if(cds_info.IsMappedToGenome()) in GetCdsDnaSequence()
507 if(cds_info.IsMappedToGenome()) { in GetProtein()
535 if(cds_info.IsMappedToGenome()) { in GetProtein()
H A Dselect_alignments_alt.cpp185 if(cds_info.IsMappedToGenome()) in FilterGenes()
H A Dgnomon_model.cpp159 if(GetCdsInfo().IsMappedToGenome()) { in isNMD()
701 if(cds_info.IsMappedToGenome()) in CdsInvariant()
1749 if(cds_info.IsMappedToGenome()) { // convert local copy to tcoords in CollectAttributes()
2027 if(cds_info.IsMappedToGenome()) { // convert local copy to tcoords in printGFF3()
H A Dasn1.cpp86 if(cds.IsMappedToGenome()) { in SModelData()
941 _ASSERT(GetCdsInfo().IsMappedToGenome()); in MakeSeqAlign()
H A Dscore.cpp1403 …((cds_info.ReadingFrame().NotEmpty() || !cds_info.PStops().empty()) && cds_info.IsMappedToGenome()) in GetScore()
H A Dchainer.cpp4594 if(cds_info.IsMappedToGenome()) in CalculateSupportAndWeightFromMembers()
7649 if(align.ReadingFrame().NotEmpty() && acds.IsMappedToGenome()) in MapOneModelToEditedContig()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/gnomon/
H A Dgnomon_model.hpp231 bool IsMappedToGenome() const { return m_genomic_coordinates; } in IsMappedToGenome() function in CCDSInfo