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/dports/biology/bbmap/bbmap/current/jgi/
H A DGatherKapaStats.java239 for(Entry<String, KapaEntry> e : w.kapaMap.entrySet()){ in analyzePlates()
240 KapaEntry ke=e.getValue(); in analyzePlates()
374 KapaEntry keSource=sink.kapaMap.get(key); in printRawResults()
533 kapaMap=new LinkedHashMap<String, KapaEntry>(3+offwells.length*2); in loadKapa()
534 kapaMap.put(correctKapaTag, new KapaEntry(name, correctKapaReads, correctKapaTag)); in loadKapa()
537 KapaEntry ke=new KapaEntry((Object[])o); in loadKapa()
551 for(KapaEntry e : kapaMap.values()){ in toString()
574 LinkedHashMap<String, KapaEntry> kapaMap;
593 class KapaEntry{ class in GatherKapaStats
603 KapaEntry(Object[] array){ in KapaEntry() method in GatherKapaStats.KapaEntry
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