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/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/spark/sv/evidence/
H A DBreakpointEvidence.java4 import com.esotericsoftware.kryo.Kryo;
44 protected BreakpointEvidence( final Kryo kryo, final Input input ) { in BreakpointEvidence()
126 protected void serialize(final Kryo kryo, final Output output ) { in serialize()
165 public ExternalEvidence( final Kryo kryo, final Input input ) { in ExternalEvidence()
200 protected void serialize( final Kryo kryo, final Output output ) { in serialize()
311 protected ReadEvidence( final Kryo kryo, final Input input ) { in ReadEvidence()
480 private SplitRead( final Kryo kryo, final Input input ) { in SplitRead()
727 private LargeIndel( final Kryo kryo, final Input input ) { in LargeIndel()
966 private InterContigPair( final Kryo kryo, final Input input ) { in InterContigPair()
1015 private OutiesPair( final Kryo kryo, final Input input ) { in OutiesPair()
[all …]
H A DKmerAndInterval.java4 import com.esotericsoftware.kryo.Kryo;
24 private KmerAndInterval( final Kryo kryo, final Input input ) { in KmerAndInterval()
30 protected void serialize( final Kryo kryo, final Output output ) { in serialize()
57 … public void write( final Kryo kryo, final Output output, final KmerAndInterval kmerAndInterval) { in write()
62 public KmerAndInterval read( final Kryo kryo, final Input input, in read()
H A DLibraryStatistics.java4 import com.esotericsoftware.kryo.Kryo;
34 private LibraryStatistics( final Kryo kryo, final Input input ) { in LibraryStatistics()
45 private void serialize( final Kryo kryo, final Output output ) { in serialize()
79 public void write( final Kryo kryo, final Output output, final LibraryStatistics stats ) { in write()
84 public LibraryStatistics read( final Kryo kryo, final Input input, in read()
H A DQNameAndInterval.java4 import com.esotericsoftware.kryo.Kryo;
31 private QNameAndInterval( final Kryo kryo, final Input input ) { in QNameAndInterval()
38 private void serialize( final Kryo kryo, final Output output ) { in serialize()
103 …public void write( final Kryo kryo, final Output output, final QNameAndInterval qNameAndInterval )… in write()
108 …public QNameAndInterval read( final Kryo kryo, final Input input, final Class<QNameAndInterval> kl… in read()
H A DReadMetadata.java4 import com.esotericsoftware.kryo.Kryo;
143 private ReadMetadata( final Kryo kryo, final Input input ) { in ReadMetadata()
192 private void serialize( final Kryo kryo, final Output output ) { in serialize()
456 final Kryo kryo = new Kryo(); in writeStandalone()
477 final Kryo kryo = new Kryo(); in readStandalone()
520 private void serialize( final Kryo kryo, final Output output ) { in serialize()
558 public void write( final Kryo kryo, final Output output, in write()
652 private void serialize( final Kryo kryo, final Output output ) { in serialize()
669 public void write( final Kryo kryo, final Output output, in write()
701 private PartitionBounds( final Kryo kryo, final Input input ) { in PartitionBounds()
[all …]
/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/spark/sv/discovery/inference/
H A DBreakpointComplications.java4 import com.esotericsoftware.kryo.Kryo;
144 protected BreakpointComplications(final Kryo kryo, final Input input) { in BreakpointComplications()
148 protected void serialize(final Kryo kryo, final Output output) { in serialize()
275 protected void serialize(final Kryo kryo, final Output output) { in serialize()
401 protected void serialize(final Kryo kryo, final Output output) {
623 protected void serialize(final Kryo kryo, final Output output) {
867 protected void serialize(final Kryo kryo, final Output output) {
927 protected void serialize(final Kryo kryo, final Output output) {
1138 protected void serialize(final Kryo kryo, final Output output) {
1263 protected void serialize(final Kryo kryo, final Output output) {
[all …]
H A DCpxVariantInducingAssemblyContig.java4 import com.esotericsoftware.kryo.Kryo;
217 private CpxVariantInducingAssemblyContig(final Kryo kryo, final Input input) { in CpxVariantInducingAssemblyContig()
238 public void serialize(final Kryo kryo, final Output output) { in serialize()
334 BasicInfo(final Kryo kryo, final Input input) { in BasicInfo()
347 void serialize(final Kryo kryo, final Output output) { in serialize()
360 public void write(final Kryo kryo, final Output output, final BasicInfo alignedContig) { in write()
365 … public BasicInfo read(final Kryo kryo, final Input input, final Class<BasicInfo> clazz) { in read()
470 private Jump(final Kryo kryo, final Input input) { in Jump()
485 public void serialize(final Kryo kryo, final Output output) { in serialize()
498 public void write(final Kryo kryo, final Output output, final Jump alignedContig) { in write()
[all …]
/dports/audio/atunes/atunes-3.1.2/src/net/sourceforge/atunes/utils/
H A DKryoFactory.java29 import com.esotericsoftware.kryo.Kryo;
54 public Kryo getKryo() throws ClassNotFoundException { in getKryo()
56 Kryo kryo = new Kryo(); in getKryo()
H A DFileSerializer.java25 import com.esotericsoftware.kryo.Kryo;
38 public File read(final Kryo kryo, final Input input, final Class<File> fileClass) { in read()
43 public void write(final Kryo kryo, final Output output, final File file) { in write()
/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/spark/sv/utils/
H A DKmerAndCount.java4 import com.esotericsoftware.kryo.Kryo;
28 private KmerAndCount(final Kryo kryo, final Input input ) { in KmerAndCount()
33 protected void serialize( final Kryo kryo, final Output output ) { in serialize()
54 … public void write( final Kryo kryo, final Output output, final KmerAndCount kmerAndInterval) { in write()
59 public KmerAndCount read(final Kryo kryo, final Input input, in read()
H A DStrandedInterval.java4 import com.esotericsoftware.kryo.Kryo;
30 public StrandedInterval(final Kryo kryo, final Input input) { in StrandedInterval()
35 private void serialize(final Kryo kryo, final Output output) { in serialize()
68 …public void write(final Kryo kryo, final Output output, final StrandedInterval strandedInterval ) { in write()
73 …public StrandedInterval read(final Kryo kryo, final Input input, final Class<StrandedInterval> kla… in read()
H A DSVKmerShort.java4 import com.esotericsoftware.kryo.Kryo;
39 private SVKmerShort(final Kryo kryo, final Input input) { in SVKmerShort()
43 private void serialize(final Kryo kryo, final Output output) { in serialize()
171 public void write( final Kryo kryo, final Output output, final SVKmerShort svKmer ) { in write()
176 … public SVKmerShort read( final Kryo kryo, final Input input, final Class<SVKmerShort> klass ) { in read()
H A DStrand.java4 import com.esotericsoftware.kryo.Kryo;
53 public void serialize(final Kryo kryo, final Output output) { in serialize()
60 public void write(final Kryo kryo, final Output output, final Strand strand) { in write()
65 public Strand read(final Kryo kryo, final Input input, final Class<Strand> kclass) { in read()
/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/spark/sv/discovery/alignment/
H A DAlignedAssembly.java4 import com.esotericsoftware.kryo.Kryo;
28 private AlignedAssembly(final Kryo kryo, final Input input) { in AlignedAssembly()
39 private void serialize(final Kryo kryo, final Output output) { in serialize()
48 … public void write( final Kryo kryo, final Output output, final AlignedAssembly alignedAssembly){ in write()
53 …public AlignedAssembly read(final Kryo kryo, final Input input, final Class<AlignedAssembly> clazz… in read()
/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/spark/pathseq/
H A DPSTaxonomyDatabase.java4 import com.esotericsoftware.kryo.Kryo;
24 private PSTaxonomyDatabase(final Kryo kryo, final Input input) { in PSTaxonomyDatabase()
40 protected void serialize(final Kryo kryo, final Output output) { in serialize()
56 …public void write(final Kryo kryo, final Output output, final PSTaxonomyDatabase taxonomyDatabase)… in write()
61 public PSTaxonomyDatabase read(final Kryo kryo, final Input input, in read()
H A DPSKmerBloomFilter.java4 import com.esotericsoftware.kryo.Kryo;
35 private PSKmerBloomFilter(final Kryo kryo, final Input input) { in PSKmerBloomFilter()
65 private void serialize(final Kryo kryo, final Output output) { in serialize()
95 public void write(final Kryo kryo, final Output output, final PSKmerBloomFilter kmerSet) { in write()
100 …public PSKmerBloomFilter read(final Kryo kryo, final Input input, final Class<PSKmerBloomFilter> k… in read()
H A DPSKmerSet.java4 import com.esotericsoftware.kryo.Kryo;
33 private PSKmerSet(final Kryo kryo, final Input input) { in PSKmerSet()
70 private void serialize(final Kryo kryo, final Output output) { in serialize()
99 public void write(final Kryo kryo, final Output output, final PSKmerSet kmerSet) { in write()
104 public PSKmerSet read(final Kryo kryo, final Input input, final Class<PSKmerSet> klass) { in read()
/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/spark/utils/
H A DHopscotchMultiMap.java4 import com.esotericsoftware.kryo.Kryo;
20 protected HopscotchMultiMap( final Kryo kryo, final Input input ) { super(kryo, input); } in HopscotchMultiMap()
29 …public void write(final Kryo kryo, final Output output, final HopscotchMultiMap hopscotchMultiMap … in write()
34 …public HopscotchMultiMap read(final Kryo kryo, final Input input, final Class<HopscotchMultiMap> k… in read()
H A DHopscotchUniqueMultiMap.java4 import com.esotericsoftware.kryo.Kryo;
21 protected HopscotchUniqueMultiMap( final Kryo kryo, final Input input ) { super(kryo, input); } in HopscotchUniqueMultiMap()
30 …public void write( final Kryo kryo, final Output output, final HopscotchUniqueMultiMap hopscotchMu… in write()
35 …public HopscotchUniqueMultiMap read( final Kryo kryo, final Input input, final Class<HopscotchUniq… in read()
H A DHopscotchSet.java4 import com.esotericsoftware.kryo.Kryo;
22 protected HopscotchSet( final Kryo kryo, final Input input ) { super(kryo, input); } in HopscotchSet()
43 public void write( final Kryo kryo, final Output output, final HopscotchSet hopscotchSet ) { in write()
48 … public HopscotchSet read( final Kryo kryo, final Input input, final Class<HopscotchSet> klass ) { in read()
H A DHopscotchMap.java4 import com.esotericsoftware.kryo.Kryo;
23 protected HopscotchMap( final Kryo kryo, final Input input ) { super(kryo, input); } in HopscotchMap()
36 public void write( final Kryo kryo, final Output output, final HopscotchMap hopscotchMap ) { in write()
41 … public HopscotchMap read( final Kryo kryo, final Input input, final Class<HopscotchMap> klass ) { in read()
H A DIntHistogram.java4 import com.esotericsoftware.kryo.Kryo;
36 private IntHistogram( final Kryo kryo, final Input input ) { in IntHistogram()
49 private void serialize( final Kryo kryo, final Output output ) { in serialize()
122 public void write( final Kryo kryo, final Output output, final IntHistogram histogram ) { in write()
127 … public IntHistogram read( final Kryo kryo, final Input input, final Class<IntHistogram> klass ) { in read()
257 private CDF( final Kryo kryo, final Input input ) { in CDF()
266 private void serialize( final Kryo kryo, final Output output ) { in serialize()
342 public void write( final Kryo kryo, final Output output, final CDF cdf ) { in write()
347 public CDF read( final Kryo kryo, final Input input, final Class<CDF> klass ) { in read()
/dports/devel/spark/spark-2.1.1/sql/core/src/test/scala/org/apache/spark/sql/
H A DDatasetSerializerRegistratorSuite.scala20 import com.esotericsoftware.kryo.{Kryo, Serializer}
51 override def registerClasses(kryo: Kryo): Unit =
61 override def write(kryo: Kryo, output: Output, t: KryoData): Unit = {
65 override def read(kryo: Kryo, input: Input, aClass: Class[KryoData]): KryoData = {
/dports/www/phpsysinfo/phpsysinfo-3.3.4/data/
H A Dcpus.ini96 0x51,0x201="Kryo Silver"
97 0x51,0x205="Kryo Gold"
98 0x51,0x211="Kryo Silver"
99 0x51,0x800="Kryo 260/280 Gold (Cortex-A73)"
100 0x51,0x801="Kryo 260/280 Silver (Cortex-A53)"
101 0x51,0x802="Kryo 385 Gold (Cortex-A75)"
102 0x51,0x803="Kryo 385 Silver (Cortex-A55)"
103 0x51,0x804="Kryo 485 Gold"
104 0x51,0x805="Kryo 485 Silver"
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/spark/pathseq/
H A DPathSeqBuildKmersSparkIntegrationTest.java3 import com.esotericsoftware.kryo.Kryo;
46 final Kryo kryo = new Kryo(); in testHopscotchSetFromFasta()
73 final Kryo kryo = new Kryo(); in testBloomFilterFromFasta()
111 final Kryo kryo = new Kryo();

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