/dports/biology/fasta3/fasta-36.3.8/src/ |
H A D | defs.h | 92 #define MAXTST 40000 /* longest query */ macro 119 #define MAXTST 1500 macro 136 #define MAXDIAG (MAXTST+MAXLIB) 138 #define MAXDIAG (MAXTST+MAXTRN)
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H A D | print_pssm.c | 92 if ((aa0 = calloc(MAXTST,sizeof(char)))==NULL) { in main() 102 n0 = getseq (qname, qascii, aa0, MAXTST, libstr, sizeof(libstr), &sq0off); in main()
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H A D | comp_lib9.c | 645 QGETLIB (aa0[0], MAXTST, m_msg.qtitle, sizeof(m_msg.qtitle), in main() 700 if (m_msg.n0 > MAXTST) { in main() 701 fprintf(stderr," sequence truncated to %d\n %s\n",MAXTST,m_msg.sqnam); in main() 702 aa0[0][MAXTST]='\0'; in main() 703 m_msg.n0=MAXTST; in main() 1811 QGETLIB (aa0[0], MAXTST, m_msg.qtitle, sizeof(m_msg.qtitle), in main()
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H A D | dropnnw2.c | 274 f_str->workspace_memory = (void *)malloc(3*16*(MAXTST+MAXLIB+32)+256); in init_work()
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H A D | dropgsw2.c | 456 f_str->workspace_memory = (void *)malloc(3*16*(MAXTST+MAXLIB+32)+256); in init_work()
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H A D | compacc2.c | 176 if (m_msp->n0 > MAXTST) { in reset_maxn()
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H A D | compacc2e.c | 177 if (m_msp->n0 > MAXTST) { in reset_maxn()
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/dports/biology/fasta/fasta/ |
H A D | align.c | 13 #define MAXTST 2000 /* longest test sequence */ macro 17 #define MAXDIAG (MAXTST+MAXLIB) 19 #define MAXTST 10000 macro 23 #define MAXDIAG (MAXTST+MAXLIB) 102 if ((aa0=(unsigned char *)calloc((size_t)MAXTST+MAXLIB,sizeof(char)))==0) { in main() 106 maxn = MAXTST+MAXLIB; in main()
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H A D | relate.c | 13 #define MAXTST 2000 /* longest test sequence */ macro 17 #define MAXTST 10000 macro 82 if ((aa0=calloc((size_t)MAXTST+MAXLIB,sizeof(char)))==0) { 86 maxn = MAXTST+MAXLIB; 98 if ((n0=getseq(tname,aa0,MAXTST,&dnaseq))==0) { 122 if ((n0=getseq(tname,aa0,MAXTST,&dnaseq))==0) {
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H A D | score_al.c | 24 #define MAXTST 2000 /* longest test sequence */ macro 28 #define MAXDIAG (MAXTST+MAXLIB) 30 #define MAXTST 10000 macro 34 #define MAXDIAG (MAXTST+MAXLIB) 129 if ((aa0=calloc((size_t)MAXTST+MAXLIB,sizeof(char)))==0) { 133 maxn = MAXTST+MAXLIB;
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H A D | lalign2.c | 22 #define MAXTST 2000 /* longest test sequence */ macro 24 #define MAXDIAG (MAXTST+MAXLIB) 27 #define MAXTST 20000 macro 29 #define MAXDIAG (MAXTST+MAXLIB) 137 maxseq = maxn = MAXTST+MAXLIB; in main() 141 if ((aa0=calloc((size_t)MAXTST+MAXLIB,sizeof(char)))==0) { in main()
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H A D | ssearch.c | 40 #define MAXTST 1000 /* longest test sequence */ macro 43 #define MAXDIAG (MAXTST+MAXTRN) 45 #define MAXTST 2000 /* longest test sequence */ macro 47 #define MAXDIAG (MAXTST+MAXLIB) 53 #define MAXTST 10000 macro 55 #define MAXDIAG (MAXTST+MAXLIB) 283 maxn = MAXTST+MAXLIB; 332 if (dnaseq==1 && n0>(MAXTST+MAXLIB)/3) { 341 if (n0 > MAXTST) { 374 if (dnaseq==1 && n0>(MAXTST+MAXLIB)/3) { [all …]
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H A D | prss.c | 33 #define MAXTST 2000 /* longest test sequence */ macro 35 #define MAXDIAG (MAXTST+MAXLIB) 38 #define MAXTST 10000 macro 40 #define MAXDIAG (MAXTST+MAXLIB) 153 if ((aa0=calloc(MAXTST+MAXLIB,sizeof(char)))==0) { 157 maxn = MAXTST+MAXLIB;
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H A D | crandseq.c | 20 #define MAXTST 2000 /* longest test sequence */ macro 24 #define MAXTST 10000 macro 82 if ((aa0=calloc(MAXTST+MAXLIB,sizeof(char)))==0) { 86 maxn = MAXTST+MAXLIB;
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H A D | randseq.c | 18 #define MAXTST 2000 /* longest test sequence */ macro 22 #define MAXTST 10000 macro 81 if ((aa0=calloc(MAXTST+MAXLIB,sizeof(char)))==0) { 85 maxn = MAXTST+MAXLIB;
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H A D | randlib.c | 21 #define MAXTST 2000 /* longest test sequence */ macro 25 #define MAXTST 20000 macro 89 maxn = MAXTST+MAXLIB;
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H A D | fffasta.c | 125 #define MAXTST 1000 /* longest test sequence */ macro 127 #define MAXDIAG (MAXTST+MAXTRN) 129 #define MAXTST 2000 /* longest test sequence */ macro 131 #define MAXDIAG (MAXTST+MAXLIB) 137 #define MAXTST 10000 macro 139 #define MAXDIAG (MAXTST+MAXLIB) 498 maxn = MAXTST+MAXLIB; 587 if (dnaseq==1 && n0>(MAXTST+MAXLIB)/3) { 596 if (n0 > MAXTST) { 686 if (dnaseq==1 && n0>(MAXTST+MAXLIB)/3) { [all …]
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H A D | pscore.c | 11 #define MAXTST 1000 /* longest test sequence */ macro
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H A D | bestscor.c | 13 #define MAXTST 1000 /* longest test sequence */ macro
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H A D | prdf.c | 44 #define MAXTST 2000 /* longest test sequence */ macro 46 #define MAXDIAG (MAXTST+MAXLIB) 49 #define MAXTST 10000 macro 51 #define MAXDIAG (MAXTST+MAXLIB) 205 if ((aa0=calloc((size_t)MAXTST+MAXLIB,sizeof(char)))==0) { 209 maxn = MAXTST+MAXLIB;
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/dports/science/dalton/dalton-66052b3af5ea7225e31178bf9a8b031913c72190/DALTON/abacus/ |
H A D | abaenr.F | 553 PARAMETER ( MAXTST=30, THRLDP = 1.D-20, DTEST=1.0D-4 ) 561 DIMENSION TEST(MAXTST),THRKAP(MAXGDM),SHIFNR(MAXGDM) 674 IF (JROOTJ.LE.MAXTST) TEST(JROOTJ)=QBTEST 837 IF (KNRSIM.GT.MAXTST ) WRITE (LUPRI,95) KNRSIM,MAXTST 838 K = MIN(KNRSIM,MAXTST)
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/dports/science/dalton/dalton-66052b3af5ea7225e31178bf9a8b031913c72190/DALTON/sirius/ |
H A D | sirnr.F | 683 PARAMETER ( MAXTST = 30 , QCNRAT = 0.80D0 )
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/dports/biology/fasta3/fasta-36.3.8/doc/ |
H A D | readme.v36 | 1271 Use MAXLIB, rather than MAXLIB+MAXTST for comp_lib6.c, which
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