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Searched refs:MAXTST (Results 1 – 23 of 23) sorted by relevance

/dports/biology/fasta3/fasta-36.3.8/src/
H A Ddefs.h92 #define MAXTST 40000 /* longest query */ macro
119 #define MAXTST 1500 macro
136 #define MAXDIAG (MAXTST+MAXLIB)
138 #define MAXDIAG (MAXTST+MAXTRN)
H A Dprint_pssm.c92 if ((aa0 = calloc(MAXTST,sizeof(char)))==NULL) { in main()
102 n0 = getseq (qname, qascii, aa0, MAXTST, libstr, sizeof(libstr), &sq0off); in main()
H A Dcomp_lib9.c645 QGETLIB (aa0[0], MAXTST, m_msg.qtitle, sizeof(m_msg.qtitle), in main()
700 if (m_msg.n0 > MAXTST) { in main()
701 fprintf(stderr," sequence truncated to %d\n %s\n",MAXTST,m_msg.sqnam); in main()
702 aa0[0][MAXTST]='\0'; in main()
703 m_msg.n0=MAXTST; in main()
1811 QGETLIB (aa0[0], MAXTST, m_msg.qtitle, sizeof(m_msg.qtitle), in main()
H A Ddropnnw2.c274 f_str->workspace_memory = (void *)malloc(3*16*(MAXTST+MAXLIB+32)+256); in init_work()
H A Ddropgsw2.c456 f_str->workspace_memory = (void *)malloc(3*16*(MAXTST+MAXLIB+32)+256); in init_work()
H A Dcompacc2.c176 if (m_msp->n0 > MAXTST) { in reset_maxn()
H A Dcompacc2e.c177 if (m_msp->n0 > MAXTST) { in reset_maxn()
/dports/biology/fasta/fasta/
H A Dalign.c13 #define MAXTST 2000 /* longest test sequence */ macro
17 #define MAXDIAG (MAXTST+MAXLIB)
19 #define MAXTST 10000 macro
23 #define MAXDIAG (MAXTST+MAXLIB)
102 if ((aa0=(unsigned char *)calloc((size_t)MAXTST+MAXLIB,sizeof(char)))==0) { in main()
106 maxn = MAXTST+MAXLIB; in main()
H A Drelate.c13 #define MAXTST 2000 /* longest test sequence */ macro
17 #define MAXTST 10000 macro
82 if ((aa0=calloc((size_t)MAXTST+MAXLIB,sizeof(char)))==0) {
86 maxn = MAXTST+MAXLIB;
98 if ((n0=getseq(tname,aa0,MAXTST,&dnaseq))==0) {
122 if ((n0=getseq(tname,aa0,MAXTST,&dnaseq))==0) {
H A Dscore_al.c24 #define MAXTST 2000 /* longest test sequence */ macro
28 #define MAXDIAG (MAXTST+MAXLIB)
30 #define MAXTST 10000 macro
34 #define MAXDIAG (MAXTST+MAXLIB)
129 if ((aa0=calloc((size_t)MAXTST+MAXLIB,sizeof(char)))==0) {
133 maxn = MAXTST+MAXLIB;
H A Dlalign2.c22 #define MAXTST 2000 /* longest test sequence */ macro
24 #define MAXDIAG (MAXTST+MAXLIB)
27 #define MAXTST 20000 macro
29 #define MAXDIAG (MAXTST+MAXLIB)
137 maxseq = maxn = MAXTST+MAXLIB; in main()
141 if ((aa0=calloc((size_t)MAXTST+MAXLIB,sizeof(char)))==0) { in main()
H A Dssearch.c40 #define MAXTST 1000 /* longest test sequence */ macro
43 #define MAXDIAG (MAXTST+MAXTRN)
45 #define MAXTST 2000 /* longest test sequence */ macro
47 #define MAXDIAG (MAXTST+MAXLIB)
53 #define MAXTST 10000 macro
55 #define MAXDIAG (MAXTST+MAXLIB)
283 maxn = MAXTST+MAXLIB;
332 if (dnaseq==1 && n0>(MAXTST+MAXLIB)/3) {
341 if (n0 > MAXTST) {
374 if (dnaseq==1 && n0>(MAXTST+MAXLIB)/3) {
[all …]
H A Dprss.c33 #define MAXTST 2000 /* longest test sequence */ macro
35 #define MAXDIAG (MAXTST+MAXLIB)
38 #define MAXTST 10000 macro
40 #define MAXDIAG (MAXTST+MAXLIB)
153 if ((aa0=calloc(MAXTST+MAXLIB,sizeof(char)))==0) {
157 maxn = MAXTST+MAXLIB;
H A Dcrandseq.c20 #define MAXTST 2000 /* longest test sequence */ macro
24 #define MAXTST 10000 macro
82 if ((aa0=calloc(MAXTST+MAXLIB,sizeof(char)))==0) {
86 maxn = MAXTST+MAXLIB;
H A Drandseq.c18 #define MAXTST 2000 /* longest test sequence */ macro
22 #define MAXTST 10000 macro
81 if ((aa0=calloc(MAXTST+MAXLIB,sizeof(char)))==0) {
85 maxn = MAXTST+MAXLIB;
H A Drandlib.c21 #define MAXTST 2000 /* longest test sequence */ macro
25 #define MAXTST 20000 macro
89 maxn = MAXTST+MAXLIB;
H A Dfffasta.c125 #define MAXTST 1000 /* longest test sequence */ macro
127 #define MAXDIAG (MAXTST+MAXTRN)
129 #define MAXTST 2000 /* longest test sequence */ macro
131 #define MAXDIAG (MAXTST+MAXLIB)
137 #define MAXTST 10000 macro
139 #define MAXDIAG (MAXTST+MAXLIB)
498 maxn = MAXTST+MAXLIB;
587 if (dnaseq==1 && n0>(MAXTST+MAXLIB)/3) {
596 if (n0 > MAXTST) {
686 if (dnaseq==1 && n0>(MAXTST+MAXLIB)/3) {
[all …]
H A Dpscore.c11 #define MAXTST 1000 /* longest test sequence */ macro
H A Dbestscor.c13 #define MAXTST 1000 /* longest test sequence */ macro
H A Dprdf.c44 #define MAXTST 2000 /* longest test sequence */ macro
46 #define MAXDIAG (MAXTST+MAXLIB)
49 #define MAXTST 10000 macro
51 #define MAXDIAG (MAXTST+MAXLIB)
205 if ((aa0=calloc((size_t)MAXTST+MAXLIB,sizeof(char)))==0) {
209 maxn = MAXTST+MAXLIB;
/dports/science/dalton/dalton-66052b3af5ea7225e31178bf9a8b031913c72190/DALTON/abacus/
H A Dabaenr.F553 PARAMETER ( MAXTST=30, THRLDP = 1.D-20, DTEST=1.0D-4 )
561 DIMENSION TEST(MAXTST),THRKAP(MAXGDM),SHIFNR(MAXGDM)
674 IF (JROOTJ.LE.MAXTST) TEST(JROOTJ)=QBTEST
837 IF (KNRSIM.GT.MAXTST ) WRITE (LUPRI,95) KNRSIM,MAXTST
838 K = MIN(KNRSIM,MAXTST)
/dports/science/dalton/dalton-66052b3af5ea7225e31178bf9a8b031913c72190/DALTON/sirius/
H A Dsirnr.F683 PARAMETER ( MAXTST = 30 , QCNRAT = 0.80D0 )
/dports/biology/fasta3/fasta-36.3.8/doc/
H A Dreadme.v361271 Use MAXLIB, rather than MAXLIB+MAXTST for comp_lib6.c, which