Searched refs:MIN_BRANCH_END_DIST (Results 1 – 9 of 9) sorted by relevance
| /dports/biology/canu/canu-2.2/src/overlapInCore/liboverlap/ |
| H A D | prefixEditDistance-forward.C | 186 …omp_get_thread_num(), e, MIN_BRANCH_END_DIST, Tail_Len, Max_Score, Score, slope, MIN_BRANCH_TAIL_S… in forward()
189 if ((e > MIN_BRANCH_END_DIST / 2) && in forward()
190 (Tail_Len >= MIN_BRANCH_END_DIST) && in forward()
194 e, MIN_BRANCH_END_DIST / 2, in forward()
195 Tail_Len, MIN_BRANCH_END_DIST, in forward()
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| H A D | prefixEditDistance-reverse.C | 209 …omp_get_thread_num(), e, MIN_BRANCH_END_DIST, Tail_Len, Max_Score, Score, slope, MIN_BRANCH_TAIL_S… in reverse()
212 if ((e > MIN_BRANCH_END_DIST / 2) && in reverse()
213 (Tail_Len >= MIN_BRANCH_END_DIST) && in reverse()
217 e, MIN_BRANCH_END_DIST / 2, in reverse()
218 Tail_Len, MIN_BRANCH_END_DIST, in reverse()
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| H A D | prefixEditDistance.C | 28 MIN_BRANCH_END_DIST = 20; in prefixEditDistance()
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| H A D | prefixEditDistance.H | 286 uint32 MIN_BRANCH_END_DIST; variable
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| /dports/biology/canu/canu-2.2/src/utgcns/libNDalign/ |
| H A D | NDalgorithm.C | 63 MIN_BRANCH_END_DIST = 20; in NDalgorithm()
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| H A D | NDalgorithm.H | 194 uint32 MIN_BRANCH_END_DIST; variable
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| /dports/biology/canu/canu-2.2/src/overlapErrorAdjustment/ |
| H A D | correctOverlaps.H | 85 #define MIN_BRANCH_END_DIST 20 macro
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| H A D | findErrors.H | 84 #define MIN_BRANCH_END_DIST 20 macro
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| /dports/biology/mummer/mummer-4.0.0beta2-2-g277dac5/src/tigr/ |
| H A D | combineMUMs.cc | 60 #define MIN_BRANCH_END_DIST 20 macro
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