Searched refs:MapFromOrigToEdited (Results 1 – 7 of 7) sorted by relevance
482 cds_info = cds_info.MapFromOrigToEdited(amap); in GetCdsDnaSequence()509 cds_info = cds_info.MapFromOrigToEdited(amap); in GetProtein()537 cds_info = cds_info.MapFromOrigToEdited(amap); in GetProtein()
186 cds_info = cds_info.MapFromOrigToEdited(model.GetAlignMap()); in FilterGenes()
335 CCDSInfo CCDSInfo::MapFromOrigToEdited(const CAlignMap& amap) const in MapFromOrigToEdited() function in CCDSInfo702 cds_info = cds_info.MapFromOrigToEdited(mrnamap); in CdsInvariant()1750 cds_info = cds_info.MapFromOrigToEdited(a.GetAlignMap()); in CollectAttributes()2028 cds_info = cds_info.MapFromOrigToEdited(a.GetAlignMap()); in printGFF3()
87 cds = cds.MapFromOrigToEdited(amap); // all coords on mRNA in SModelData()
1404 cds_info = cds_info.MapFromOrigToEdited(mrnamap); in GetScore()
4595 cds_info = cds_info.MapFromOrigToEdited(mrnamap); in CalculateSupportAndWeightFromMembers()5014 auto cds_info_t = cds_info.MapFromOrigToEdited(amap); in SetConfirmedEnds()7569 model.SetCdsInfo(srcmodel.GetCdsInfo().MapFromOrigToEdited(srcmodel.GetAlignMap())); in MapOneModelToOrigContig()7650 acds = acds.MapFromOrigToEdited(amap); in MapOneModelToEditedContig()
232 CCDSInfo MapFromOrigToEdited(const CAlignMap& amap) const;