| /dports/audio/afsp/AFsp-v8r2/audio/CompAudio/ |
| H A D | CAprcorr.c | 62 Stats->Ndiff); in CAprcorr()
65 Stats->Ndiff, Stats->Nrun); in CAprcorr()
69 printf (CAMF_DiffP1, 100. * Stats->Diffmax, Stats->Ndiff); in CAprcorr()
71 printf (CAMF_DiffP2, 100. * Stats->Diffmax, Stats->Ndiff, Stats->Nrun); in CAprcorr()
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| H A D | CompAudio.c | 300 if (Nfiles == 2 && (StatsT.Ndiff > 0 || ScaleF[0] != ScaleF[1])) in main()
307 if (StatsT.Ndiff > 0 || ScaleF[0] != ScaleF[1]) { in main()
312 if (StatsT.Ndiff == 0) { in main()
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| H A D | CASNR.c | 81 if (Stats->Ndiff == 0) { in CASNR()
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| H A D | CompAudio.h | 51 long int Ndiff; /* Number of different samples */ member
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| H A D | CAcorr.c | 129 ++Stats->Ndiff; in CA_corr()
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| /dports/math/vtk9/VTK-9.1.0/IO/Export/Testing/Data/Input/ |
| H A D | dented.sl | 12 normal Ndiff;
20 Ndiff = normalize(N) - normalize(Ng);
24 N = normalize(calculatenormal (P2)) + Ndiff;
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| /dports/math/vtk8/VTK-8.2.0/IO/Export/Testing/Data/Input/ |
| H A D | dented.sl | 12 normal Ndiff;
20 Ndiff = normalize(N) - normalize(Ng);
24 N = normalize(calculatenormal (P2)) + Ndiff;
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| /dports/biology/mmseqs2/MMseqs2-13-45111/src/alignment/ |
| H A D | MsaFilter.cpp | 62 …ector<Matcher::result_t> &alnResults, int coverage, int qid, float qsc, int max_seqid, int Ndiff) { in filter() argument
63 …ze = filter(msa.setSize, msa.centerLength, coverage, qid, qsc, max_seqid, Ndiff, (const char **) m… in filter()
80 … const float qsc, const int max_seqid, int Ndiff, const char **X, const bool shuffleMsa) { in filter() argument
93 int diffNmax = Ndiff; // current maximum difference of Nmax[i] and Ndiff in filter()
187 if (Ndiff <= 0 || Ndiff >= N_in) { in filter()
189 Ndiff = N_in; in filter()
190 diffNmax = Ndiff; in filter()
315 if (Nmax[i] < Ndiff) { in filter()
318 if (diffNmax < Ndiff - Nmax[i]) in filter()
319 diffNmax = Ndiff - Nmax[i]; in filter()
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| H A D | MsaFilter.h | 37 …vector<Matcher::result_t> &alnResults, int coverage, int qid, float qsc, int max_seqid, int Ndiff);
39 … const float qsc, const int max_seqid, int Ndiff, const char **X, const bool shuffleMsa);
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| /dports/security/nmap/nmap-7.91/ndiff/ |
| H A D | README | 1 Ndiff
3 Ndiff is a tool to aid in the comparison of Nmap scans. Specifically, it
55 Ndiff started as a project by Michael Pattrick <mpattrick@rhinovirus.org>
63 Ndiff web site: https://nmap.org/ndiff/
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| H A D | LICENSE | 2 Ndiff is distributed under the same license as Nmap. See the file LICENSE in
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| /dports/biology/hhsuite/hh-suite-3.3.0/src/ |
| H A D | hhfilter.cpp | 50 …f(" at least this many seqs in each MSA block of length 50 (def=%i) \n", par.Ndiff); in help()
119 par.Ndiff = atoi(argv[++i]); in ProcessArguments()
153 par.Ndiff = 0; in main()
201 qali.N_filtered = qali.Filter(par.max_seqid, S, par.coverage, par.qid, par.qsc,par.Ndiff); in main()
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| H A D | hhdecl.cpp | 39 Ndiff = 100; // pick Ndiff most different sequences from alignment in Parameters()
135 Ndiff_db = Ndiff; in Parameters()
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| H A D | hhhmm.h | 116 const int coverage, const int qid, const int Ndiff,
120 const int coverage, const int qid, const int Ndiff,
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| H A D | hhmake.cpp | 81 …f(" at least this many seqs in each MSA block of length 50 (def=%i) \n", par.Ndiff); in help()
195 par.Ndiff = atoi(argv[++i]); in ProcessArguments()
308 par.Ndiff = 100; // pick Ndiff most different sequences from alignment in main()
376 …q.WriteToFile(par.outfile, par.append, par.max_seqid, par.coverage, par.qid, par.Ndiff, par.qsc, p… in main()
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| H A D | hhconsensus.cpp | 69 par.Ndiff); in help()
185 par.Ndiff = atoi(argv[++i]); in ProcessArguments()
286 par.Ndiff = 0; in main()
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| H A D | hhalignment.h | 77 …int Filter2(char keep[], int coverage, int qid, float qsc, int seqid1, int seqid2, int Ndiff, cons…
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| H A D | hhdecl.h | 190 …int Ndiff; // Pick Ndiff most different sequences that passed the other filter thresh… variable
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| /dports/science/apbs/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/contrib/iapbs/test/ |
| H A D | ndiff.awk | 59 exit (Ndiff != 0)
314 Ndiff = 0
464 Ndiff++
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| /dports/math/ndiff/ndiff-2.00/ |
| H A D | ndiff.awk | 59 exit (Ndiff != 0)
313 Ndiff = 0
463 Ndiff++
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| /dports/biology/clustal-omega/clustal-omega-1.2.4/src/hhalign/ |
| H A D | hhalignment.h | 78 int Filter2(char keep[], int coverage, int qid, float qsc, int seqid1, int seqid2, int Ndiff);
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| H A D | hhdecl-C.h | 128 …int Ndiff; // Pick Ndiff most different sequences that passed the other filter thresh… variable
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| H A D | hhalignment-C.h | 1025 Alignment::Filter2(char keep[], int coverage, int qid, float qsc, int seqid1, int seqid2, int Ndiff) in Filter2() argument
1037 int diffNmax=Ndiff; // current maximum difference of Nmax[i] and Ndiff /* MR1 */ in Filter2()
1105 if (Ndiff<=0 || Ndiff>=N_in) {seqid1=seqid2; Ndiff=N_in; diffNmax=Ndiff;} in Filter2()
1194 if (Nmax[i]<Ndiff) in Filter2()
1198 if (diffNmax<Ndiff-Nmax[i]) diffNmax=Ndiff-Nmax[i]; in Filter2()
1321 if (Ndiff<N_in && Ndiff>0) in Filter2()
2696 N_filtered = Tali.Filter(par.max_seqid,par.coverage,par.qid,par.qsc,par.Ndiff); in MergeMasterSlave()
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| H A D | hhfunc-C.h | 619 par.qid, par.qsc, par.Ndiff);
1009 int iParNdiff=par.Ndiff; in HHMake_Wrapper()
1030 par.Ndiff=100; // pick Ndiff most different sequences from alignment in HHMake_Wrapper()
1062 par.Ndiff=iParNdiff; in HHMake_Wrapper()
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| /dports/biology/mmseqs2/MMseqs2-13-45111/src/util/ |
| H A D | result2msa.cpp | 243 …(par.qid * 100), par.qsc, static_cast<int>(par.filterMaxSeqId * 100), par.Ndiff, (const char **) r… in result2msa()
298 …(par.qid * 100), par.qsc, static_cast<int>(par.filterMaxSeqId * 100), par.Ndiff, (const char **) r… in result2msa()
337 …, static_cast<int>(par.qid * 100), par.qsc, static_cast<int>(par.filterMaxSeqId * 100), par.Ndiff); in result2msa()
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