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Searched refs:OPTION_MISMATCHES (Results 1 – 9 of 9) sorted by relevance

/dports/biology/ugene/ugene-40.1/src/plugins/genome_aligner/src/
H A DGenomeAlignerSettingsWidget.cpp95 settings.insert(GenomeAlignerTask::OPTION_MISMATCHES, mismatchesAllowedSpinBox->value()); in getDnaAssemblyCustomSettings()
99 settings.insert(GenomeAlignerTask::OPTION_MISMATCHES, 0); in getDnaAssemblyCustomSettings()
H A DGenomeAlignerTask.h64 static const QString OPTION_MISMATCHES; variable
H A DGenomeAlignerTask.cpp53 const QString GenomeAlignerTask::OPTION_MISMATCHES("mismatches_allowed"); member in U2::GenomeAlignerTask
90 alignContext.nMismatches = settings.getCustomValue(OPTION_MISMATCHES, 0).toInt(); in GenomeAlignerTask()
H A DGenomeAlignerCMDLineTask.cpp163 settings.setCustomValue(GenomeAlignerTask::OPTION_MISMATCHES, mismatchCount); in prepare()
H A DGenomeAlignerWorker.cpp196 settings.setCustomValue(GenomeAlignerTask::OPTION_MISMATCHES, nMismatches); in getSettings()
/dports/biology/ugene/ugene-40.1/src/plugins/external_tool_support/src/bowtie2/
H A DBowtie2Task.h67 static const QString OPTION_MISMATCHES; variable
H A DBowtie2Task.cpp95 arguments.append(settings.getCustomValue(Bowtie2Task::OPTION_MISMATCHES, 0).toString()); in prepare()
213 const QString Bowtie2Task::OPTION_MISMATCHES = "mismatches"; member in U2::Bowtie2Task
H A DBowtie2SettingsWidget.cpp69 settings.insert(Bowtie2Task::OPTION_MISMATCHES, mismatchesSpinBox->value()); in getDnaAssemblyCustomSettings()
H A DBowtie2Worker.cpp71 customSettings.insert(Bowtie2Task::OPTION_MISMATCHES, getValue<QString>(MISMATCHES_NUMBER)); in getCustomParameters()