Searched refs:PICK_IUPAC (Results 1 – 4 of 4) sorted by relevance
| /dports/biology/bio-mocha/bcftools-1.14/ |
| H A D | consensus.c | 54 #define PICK_IUPAC 16 macro
512 if ( args->allele==PICK_IUPAC ) in apply_variant()
1153 else if ( !strcasecmp(optarg,"I") ) args->allele |= PICK_IUPAC; in main_consensus()
1154 … else if ( !strcasecmp(optarg,"1pIu") ) args->allele |= PICK_IUPAC, args->haplotype = 1; in main_consensus()
1155 … else if ( !strcasecmp(optarg,"2pIu") ) args->allele |= PICK_IUPAC, args->haplotype = 2; in main_consensus()
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| /dports/biology/bcftools/bcftools-1.14/ |
| H A D | consensus.c | 54 #define PICK_IUPAC 16 macro
512 if ( args->allele==PICK_IUPAC ) in apply_variant()
1153 else if ( !strcasecmp(optarg,"I") ) args->allele |= PICK_IUPAC; in main_consensus()
1154 … else if ( !strcasecmp(optarg,"1pIu") ) args->allele |= PICK_IUPAC, args->haplotype = 1; in main_consensus()
1155 … else if ( !strcasecmp(optarg,"2pIu") ) args->allele |= PICK_IUPAC, args->haplotype = 2; in main_consensus()
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| /dports/biology/py-pysam/pysam-0.18.0/bcftools/ |
| H A D | consensus.c | 54 #define PICK_IUPAC 16 macro
512 if ( args->allele==PICK_IUPAC ) in apply_variant()
1153 else if ( !strcasecmp(optarg,"I") ) args->allele |= PICK_IUPAC; in main_consensus()
1154 … else if ( !strcasecmp(optarg,"1pIu") ) args->allele |= PICK_IUPAC, args->haplotype = 1; in main_consensus()
1155 … else if ( !strcasecmp(optarg,"2pIu") ) args->allele |= PICK_IUPAC, args->haplotype = 2; in main_consensus()
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| H A D | consensus.c.pysam.c | 56 #define PICK_IUPAC 16 macro
514 if ( args->allele==PICK_IUPAC ) in apply_variant()
1155 else if ( !strcasecmp(optarg,"I") ) args->allele |= PICK_IUPAC; in main_consensus()
1156 … else if ( !strcasecmp(optarg,"1pIu") ) args->allele |= PICK_IUPAC, args->haplotype = 1; in main_consensus()
1157 … else if ( !strcasecmp(optarg,"2pIu") ) args->allele |= PICK_IUPAC, args->haplotype = 2; in main_consensus()
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