/dports/biology/ugene/ugene-40.1/data/samples/GFF/ |
H A D | 5prime_utr_intron_A20.gff | 3 …PMID 17351132) 5_prime_UTR_intron 794173 794525 . - . ID=orf19.6663_5utr_intron;Name=5prime_UTR_in… 4 …PMID 17351132) 5_prime_UTR_intron 676331 677073 . - . ID=orf19.3014_5utr_intron;Name=5prime_UTR_in… 5 …PMID 17351132) 5_prime_UTR_intron 573316 574012 . - . ID=orf19.255_5utr_intron;Name=5prime_UTR_int… 6 …PMID 17351132) 5_prime_UTR_intron 549415 549646 . - . ID=orf19.2735_5utr_intron;Name=5prime_UTR_in… 7 …PMID 17351132) 5_prime_UTR_intron 512008 513189 . - . ID=orf19.2929_5utr_intron;Name=5prime_UTR_in… 8 …PMID 17351132) 5_prime_UTR_intron 337768 337991 . - . ID=orf19.4623.3_5utr_intron;Name=5prime_UTR_… 9 …PMID 17351132) 5_prime_UTR_intron 316445 316833 . - . ID=orf19.4632_5utr_intron;Name=5prime_UTR_in… 10 …PMID 17351132) 5_prime_UTR_intron 288355 288758 . - . ID=orf19.1470_5utr_intron;Name=5prime_UTR_in… 11 …PMID 17351132) 5_prime_UTR_intron 1968404 1968667 . - . ID=orf19.4759_5utr_intron;Name=5prime_UTR_… 12 …PMID 17351132) 5_prime_UTR_intron 189001 189282 . - . ID=orf19.7025_5utr_intron;Name=5prime_UTR_in… [all …]
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H A D | 5prime_utr_intron_A21.gff | 3 …PMID 17351132) 5_prime_UTR_intron 793785 794137 . - . ID=orf19.6663_5utr_intron;Name=5prime_UTR_in… 4 …PMID 17351132) 5_prime_UTR_intron 676025 676767 . - . ID=orf19.3014_5utr_intron;Name=5prime_UTR_in… 5 …PMID 17351132) 5_prime_UTR_intron 572849 573545 . - . ID=orf19.255_5utr_intron;Name=5prime_UTR_int… 6 …PMID 17351132) 5_prime_UTR_intron 549196 549427 . - . ID=orf19.2735_5utr_intron;Name=5prime_UTR_in… 7 …PMID 17351132) 5_prime_UTR_intron 511701 512882 . - . ID=orf19.2929_5utr_intron;Name=5prime_UTR_in… 8 …PMID 17351132) 5_prime_UTR_intron 337611 337834 . - . ID=orf19.4623.3_5utr_intron;Name=5prime_UTR_… 9 …PMID 17351132) 5_prime_UTR_intron 316288 316676 . - . ID=orf19.4632_5utr_intron;Name=5prime_UTR_in… 10 …PMID 17351132) 5_prime_UTR_intron 288235 288638 . - . ID=orf19.1470_5utr_intron;Name=5prime_UTR_in… 11 …PMID 17351132) 5_prime_UTR_intron 1966921 1967184 . - . ID=orf19.4759_5utr_intron;Name=5prime_UTR_… 12 …PMID 17351132) 5_prime_UTR_intron 188838 189119 . - . ID=orf19.7025_5utr_intron;Name=5prime_UTR_in… [all …]
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/dports/biology/py-biopython/biopython-1.79/Tests/UniProt/ |
H A D | gene_association.goa_yeast.1.gaf | 4 UniProtKB P17536 TPM1 GO:0000001 PMID:10652251 TAS P Tropomyosin-1 TPM1_YEAST|YNL079C|N2332|TPM1|… 8 UniProtKB P19524 MYO2 GO:0000001 PMID:12391144 IMP P Myosin-2 MYO2_YEAST|CDC66|YOR326W|MYO2|O6167… 26 UniProtKB P19524 MYO2 GO:0000011 PMID:8978821 IGI P Myosin-2 MYO2_YEAST|CDC66|YOR326W|MYO2|O6167|… 27 UniProtKB P22217 TRX1 GO:0000011 PMID:8603912 IMP P Thioredoxin-1 TRX1_YEAST|YLR043C|TRX2|TRX1|D6… 28 UniProtKB P22217 TRX1 GO:0000011 PMID:9015301 IMP P Thioredoxin-1 TRX1_YEAST|YLR043C|TRX2|TRX1|D6… 79 UniProtKB P40414 TPM2 GO:0000001 PMID:10652251 TAS P Tropomyosin-2 TPM2_YEAST|YIL138C|TPM2|D6VVE8… 81 UniProtKB P40414 TPM2 GO:0000011 PMID:10652251 TAS P Tropomyosin-2 TPM2_YEAST|YIL138C|TPM2|D6VVE8… 82 UniProtKB P40961 PHB1 GO:0000001 PMID:12882345 IMP P Prohibitin-1 PHB1_YEAST|PHB|PHB1|YGR132C|D6V… 262 UniProtKB P33418 LOS1 GO:0000049 PMID:11959996 TAS F Exportin-T XPOT_YEAST|YKL205W|LOS1|D6VWZ8 pr… 276 UniProtKB P32527 ZUO1 GO:0000054 PMID:20368619 IMP P Zuotin ZUO1_YEAST|YGR285C|ZUO1|D6VV62 protei… [all …]
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H A D | goa_yeast.gaf | 374 UniProtKB D6VTK4 STE2 GO:0000750 PMID:3037311 IMP P Pheromone alpha factor receptor STE2_YEAST|ST… 377 UniProtKB D6VTK4 STE2 GO:0004934 PMID:2161538 IDA F Pheromone alpha factor receptor STE2_YEAST|ST… 567 UniProtKB O13539 THP2 GO:0000445 PMID:11979277 IMP C THO complex subunit THP2 THP2_YEAST|THP2|YHR… 568 UniProtKB O13539 THP2 GO:0000445 PMID:11979277 IPI C THO complex subunit THP2 THP2_YEAST|THP2|YHR… 569 UniProtKB O13539 THP2 GO:0000446 PMID:11060033 IMP C THO complex subunit THP2 THP2_YEAST|THP2|YHR… 570 UniProtKB O13539 THP2 GO:0000446 PMID:11060033 IPI C THO complex subunit THP2 THP2_YEAST|THP2|YHR… 571 UniProtKB O13539 THP2 GO:0000723 PMID:24084588 IMP P THO complex subunit THP2 THP2_YEAST|THP2|YHR… 572 UniProtKB O13539 THP2 GO:0003676 PMID:12093753 IDA F THO complex subunit THP2 THP2_YEAST|THP2|YHR… 573 UniProtKB O13539 THP2 GO:0006310 PMID:11060033 IMP P THO complex subunit THP2 THP2_YEAST|THP2|YHR… 575 UniProtKB O13539 THP2 GO:0006368 PMID:12093753 IMP P THO complex subunit THP2 THP2_YEAST|THP2|YHR… [all …]
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/dports/biology/emboss/EMBOSS-6.6.0/test/data/ |
H A D | aaindex1.test | 23 R PMID:364941 46 R PMID:364941 68 R PMID:364941 87 R PMID:364941 99 R PMID:364941 111 R PMID:364941 123 R PMID:364941 135 R PMID:364941 149 R PMID:364941 162 R PMID:364941 [all …]
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/dports/security/p5-Net-SAML/zxid-1.42/c/ |
H A D | zx-pmm-dec.c | 84 if (!x->PMID) in zx_DEC_ELEM_pmm_PMActivateItem() 85 x->PMID = (struct zx_prov_PMID_s*)el; in zx_DEC_ELEM_pmm_PMActivateItem() 162 if (!x->PMID) in zx_DEC_ELEM_pmm_PMDeactivateItem() 163 x->PMID = (struct zx_prov_PMID_s*)el; in zx_DEC_ELEM_pmm_PMDeactivateItem() 235 if (!x->PMID) in zx_DEC_ELEM_pmm_PMDeleteItem() 236 x->PMID = (struct zx_prov_PMID_s*)el; in zx_DEC_ELEM_pmm_PMDeleteItem() 283 if (!x->PMID) in zx_DEC_ELEM_pmm_PMGetStatus() 284 x->PMID = (struct zx_prov_PMID_s*)el; in zx_DEC_ELEM_pmm_PMGetStatus()
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H A D | zx-prov-dec.c | 126 if (!x->PMID) in zx_DEC_ELEM_prov_PMActivateItem() 127 x->PMID = (struct zx_prov_PMID_s*)el; in zx_DEC_ELEM_prov_PMActivateItem() 204 if (!x->PMID) in zx_DEC_ELEM_prov_PMDeactivateItem() 205 x->PMID = (struct zx_prov_PMID_s*)el; in zx_DEC_ELEM_prov_PMDeactivateItem() 281 if (!x->PMID) in zx_DEC_ELEM_prov_PMDeleteItem() 282 x->PMID = (struct zx_prov_PMID_s*)el; in zx_DEC_ELEM_prov_PMDeleteItem() 332 if (!x->PMID) in zx_DEC_ELEM_prov_PMDescriptor() 333 x->PMID = (struct zx_prov_PMID_s*)el; in zx_DEC_ELEM_prov_PMDescriptor() 859 if (!x->PMID) in zx_DEC_ELEM_prov_PMGetStatus() 1082 if (!x->PMID) in zx_DEC_ELEM_prov_PMStatus() [all …]
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/dports/security/p5-Net-SAML/zxid-1.42/sg/ |
H A D | liberty-idwsf-prov-v1.0.sg | 12 PMID -> %prov:PMIDType 19 prov:PMID 50 prov:PMID 183 prov:PMID 199 prov:PMID 254 prov:PMID 263 prov:PMID* 290 prov:PMID
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H A D | liberty-idwsf-pmm-v1.0.sg | 42 prov:PMID 58 prov:PMID 73 prov:PMID 99 prov:PMID*
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/dports/biology/emboss/EMBOSS-6.6.0/emboss/data/OBO/ |
H A D | pathway.obo | 1085 …primarily involved in the regulation of gene expression." [PubMed:PMID\: 11467446; PMID\: 11152757] 2133 …ury as well as inflammatory cytokines" [PubMed :PMID\: 10209154 ; PMID\: 14570565; PMID\: 17306385… 2456 …ism, angiogenesis and erythropoiesis." [PubMed:PMID\: 11181957 PMID\: 12603312 \, PMID\: 14597660… 3171 …r as well as neuroendocrine and renal functions." [PubMed:PMID\: 15911062 PMID\: 15758553; PMID\: … 3177 …lation of body fluid volume and blood pressure. " [PubMed:PMID\: 15911062 PMID\: 15758553; PMID\: … 3184 …hose elicited by the atrial natriuretic peptide." [PubMed:PMID\: 15911062 PMID\: 15758553; PMID\: … 3191 …activation via Gi family of G-protein. " [PubMed:PMID\: 15911062 PMID\: 15758553; PMID\: 15246247;… 3549 …and cross-talk." [Gene ontology:GO\:0002255, XX:PMID\: 12558525\, PMID\: 12793984 PMID\: 16177542… 3908 …pment and clinical use of its analogs." [OubMed:PMID\: 16625838; PMID\: 15153426; PMID\: 15078190;… 3965 …ular diseases, diabetes and metabolic syndrome." [PubMed:PMID\: 16823476; PMID\: 16634986; PMID\: … [all …]
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/dports/biology/ncbi-entrez-direct/ncbi-entrez-direct-14.9.20210423/ |
H A D | pm-stash | 31 xtract -pattern DeleteCitation -block PMID -tab "\n" -sep "." -element "PMID" | 52 -block MedlineCitation/PMID -if "@Version" -gt 1 -element "PMID" | 79 -index MedlineCitation/PMID^Version -pattern PubmedArticle
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H A D | pm-refresh | 38 xtract -pattern PubmedArticle -element MedlineCitation/PMID | 53 -index MedlineCitation/PMID^Version -pattern PubmedArticle
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/dports/biology/emboss/EMBOSS-6.6.0/doc/programs/master/emboss/apps/inc/ |
H A D | aaindexextract.input | 9 R LIT:2004003a PMID:354496 29 R PMID:364941 52 R PMID:364941 68 R PMID:364941 88 R LIT:0807099 PMID:7108955
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/dports/biology/emboss/EMBOSS-6.6.0/test/pir/ |
H A D | pir4.ref | 9 A;Reference number: A32902; MUID:89336791; PMID:2758468 16 A;Reference number: A55177; MUID:90304899; PMID:1694726 30 A;Reference number: A45758; MUID:89093442; PMID:2910917 37 A;Reference number: I59122; MUID:88234536; PMID:2836867 57 A;Reference number: JC5705; MUID:98104043; PMID:9443806
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H A D | pir1.ref | 9 A;Reference number: A31764; MUID:89071748; PMID:2849112 29 A;Reference number: I55192; MUID:89008207; PMID:2844747 69 A;Reference number: A00003; MUID:66045191; PMID:4954366 103 A;Reference number: A23057; MUID:85215501; PMID:2987801 111 A;Reference number: A04604; MUID:77134768; PMID:191069 131 A;Reference number: A04605; MUID:81215609; PMID:6263917 138 A;Reference number: A28160; MUID:88198250; PMID:2834389 145 A;Reference number: A04604; MUID:77134768; PMID:191069 163 A;Reference number: A00009; MUID:66093127; PMID:5905125 180 A;Reference number: A04608; MUID:77087753; PMID:188448 [all …]
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H A D | pir2.ref | 9 A;Reference number: S29350; MUID:93220398; PMID:8385407 16 A;Reference number: S17978; MUID:92035085; PMID:1657417 37 A;Reference number: S11172; MUID:91021493; PMID:2171242 72 A;Reference number: S00034; MUID:87246667; PMID:3036517 88 A;Reference number: A31558; MUID:89096831; PMID:2850466
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H A D | pir3.ref | 9 A;Reference number: JH0225; MUID:91078646; PMID:1701750 36 A;Reference number: A45963; MUID:87106763; PMID:3026891
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/dports/biology/ncbi-toolkit/ncbi/network/medarch/client/ |
H A D | mla.asn | 39 uidtopmid [8] INTEGER, -- get PMID for MUID 40 pmidtouid [9] PubMedId, -- get MUID for PMID 43 citmatchpmid [12] Pub, -- citation match, PMID on out 46 citlstpmids [15] Pub, -- generate list of PMID for Pub
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/dports/biology/ncbi-toolkit/ncbi/access/ |
H A D | mla2.asn | 39 uidtopmid [8] INTEGER, -- get PMID for MUID 40 pmidtouid [9] PubMedId, -- get MUID for PMID 43 citmatchpmid [12] Pub, -- citation match, PMID on out 46 citlstpmids [15] Pub, -- generate list of PMID for Pub
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objects/mla/ |
H A D | mla.asn | 39 uidtopmid [8] INTEGER, -- get PMID for MUID 40 pmidtouid [9] PubMedId, -- get MUID for PMID 43 citmatchpmid [12] Pub, -- citation match, PMID on out 46 citlstpmids [15] Pub, -- generate list of PMID for Pub
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objects/mla/ |
H A D | mla.asn | 39 uidtopmid [8] INTEGER, -- get PMID for MUID 40 pmidtouid [9] PubMedId, -- get MUID for PMID 43 citmatchpmid [12] Pub, -- citation match, PMID on out 46 citlstpmids [15] Pub, -- generate list of PMID for Pub
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/dports/biology/py-pysam/pysam-0.18.0/doc/ |
H A D | index.rst | 60 PMID: `19505943 <https://pubmed.ncbi.nlm.nih.gov/19505943>`_. 65 PMID: `33594436 <https://pubmed.ncbi.nlm.nih.gov/33594436>`_. 70 PMID: `33590861 <https://pubmed.ncbi.nlm.nih.gov/33590861>`_.
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/dports/biology/bio-mocha/bcftools-1.14/test/ |
H A D | prune.2.1.out | 8 ##INFO=<ID=LD,Number=1,Type=Float,Description="Pairwise Lewontin's D' (PMID:19433632) with the POS_… 10 ##INFO=<ID=HD,Number=1,Type=Float,Description="Pairwise Ragsdale's \hat{D} (PMID:31697386) with the…
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H A D | prune.1.1.out | 9 ##INFO=<ID=LD,Number=1,Type=Float,Description="Pairwise Lewontin's D' (PMID:19433632) with the POS_… 11 ##INFO=<ID=HD,Number=1,Type=Float,Description="Pairwise Ragsdale's \hat{D} (PMID:31697386) with the…
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/dports/biology/bcftools/bcftools-1.14/test/ |
H A D | prune.2.1.out | 8 ##INFO=<ID=LD,Number=1,Type=Float,Description="Pairwise Lewontin's D' (PMID:19433632) with the POS_… 10 ##INFO=<ID=HD,Number=1,Type=Float,Description="Pairwise Ragsdale's \hat{D} (PMID:31697386) with the…
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