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Searched refs:RAZERS_UNGAPPED (Results 1 – 3 of 3) sorted by relevance

/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/razers3/
H A DoutputFormat.h234 if (options.gapMode == RAZERS_UNGAPPED) in getErrorDistribution()
504 options.dumpAlignment = (options.gapMode == RAZERS_UNGAPPED); in dumpMatches()
552 if (options.gapMode == RAZERS_UNGAPPED) in dumpMatches()
959 … if (qual.errors > 0 && options.dumpAlignment && options.gapMode == RAZERS_UNGAPPED) in dumpMatches()
1257 if (options.gapMode == RAZERS_UNGAPPED) in dumpMatches()
H A Drazers.cpp553 options.gapMode = (isSet(parser, "no-gaps")) ? RAZERS_UNGAPPED : RAZERS_GAPPED; in extractOptions()
818 if (options.gapMode == RAZERS_UNGAPPED) in main()
H A Drazers.h142 enum GapMode {RAZERS_GAPPED, RAZERS_UNGAPPED}; enumerator