Searched refs:RECODE_BEAGLE (Results 1 – 3 of 3) sorted by relevance
12076 …if (recode_modifier & (RECODE_23 | RECODE_A_TRANSPOSE | RECODE_BEAGLE | RECODE_BEAGLE_NOMAP | RECO… in recode()12107 …if (recode_modifier & (RECODE_A_TRANSPOSE | RECODE_BEAGLE | RECODE_BEAGLE_NOMAP | RECODE_BIMBAM | … in recode()12147 } else if (recode_modifier & (RECODE_BEAGLE | RECODE_BEAGLE_NOMAP)) { in recode()12501 …if (!(recode_modifier & (RECODE_A | RECODE_AD | RECODE_BEAGLE | RECODE_BEAGLE_NOMAP | RECODE_FASTP… in recode()13192 } else if (recode_modifier & (RECODE_BEAGLE | RECODE_BEAGLE_NOMAP)) { in recode()14303 if (!(recode_modifier & (RECODE_BEAGLE | RECODE_FASTPHASE | RECODE_FASTPHASE_1CHR | RECODE_HV))) { in recode()14310 if (recode_modifier & RECODE_BEAGLE) { in recode()
534 #define RECODE_BEAGLE 0x100 macro
3842 recode_modifier |= RECODE_BEAGLE; in main()10580 if (recode_type_set(&recode_modifier, RECODE_BEAGLE)) { in main()12903 } else if ((recode_modifier & RECODE_BEAGLE) && chrom_info.zero_extra_chroms) { in main()