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Searched refs:RET_INVALID_FORMAT (Results 1 – 19 of 19) sorted by relevance

/dports/biology/plink/plink-ng-79b2df8c/1.9/
H A Dplink_cnv.c49 retval = RET_INVALID_FORMAT; in cnv_subset_load()
329 retval = RET_INVALID_FORMAT; in cnv_intersect_load()
372 retval = RET_INVALID_FORMAT; in cnv_first_nonheader_line()
700 retval = RET_INVALID_FORMAT; in cnv_make_map()
845 retval = RET_INVALID_FORMAT; in validate_cnv_map()
849 retval = RET_INVALID_FORMAT; in validate_cnv_map()
856 retval = RET_INVALID_FORMAT; in validate_cnv_map()
H A Dplink_misc.c231 retval = RET_INVALID_FORMAT; in makepheno_load()
429 retval = RET_INVALID_FORMAT; in load_pheno()
444 return RET_INVALID_FORMAT; in convert_tail_pheno()
646 retval = RET_INVALID_FORMAT; in apply_cm_map()
764 retval = RET_INVALID_FORMAT; in update_marker_cms()
920 retval = RET_INVALID_FORMAT; in update_marker_pos()
1028 retval = RET_INVALID_FORMAT; in update_marker_names()
1204 retval = RET_INVALID_FORMAT; in update_marker_alleles()
1356 retval = RET_INVALID_FORMAT; in flip_strand()
1448 retval = RET_INVALID_FORMAT; in update_sample_ids()
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H A Dplink_data.c69 return RET_INVALID_FORMAT; in sort_item_ids_nx()
385 retval = RET_INVALID_FORMAT; in load_map()
1160 retval = RET_INVALID_FORMAT; in load_bim()
1164 retval = RET_INVALID_FORMAT; in load_bim()
1168 retval = RET_INVALID_FORMAT; in load_bim()
1172 retval = RET_INVALID_FORMAT; in load_bim()
1181 retval = RET_INVALID_FORMAT; in load_bim()
1680 retval = RET_INVALID_FORMAT; in load_covars()
2282 retval = RET_INVALID_FORMAT; in zero_cluster_init()
5175 return RET_INVALID_FORMAT; in incr_text_allele_str()
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H A Dprettify.c25 #define RET_INVALID_FORMAT 6 macro
253 retval = RET_INVALID_FORMAT; in scan_column_widths()
H A Ddbl2txt.c13 #define RET_INVALID_FORMAT 6 macro
621 retval = RET_INVALID_FORMAT; in main()
H A Dplink_set.c581 retval = RET_INVALID_FORMAT; in load_range_list()
1109 if (retval == RET_INVALID_FORMAT) { in define_sets()
1676 retval = RET_INVALID_FORMAT; in define_sets()
1681 retval = RET_INVALID_FORMAT; in define_sets()
2394 retval = RET_INVALID_FORMAT; in scrape_extra_chroms()
2519 if (retval == RET_INVALID_FORMAT) { in annotate()
2712 if (retval == RET_INVALID_FORMAT) { in annotate()
3229 retval = RET_INVALID_FORMAT; in annotate()
3306 if (retval == RET_INVALID_FORMAT) { in gene_report()
3692 retval = RET_INVALID_FORMAT; in gene_report()
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H A Dplink_filter.c185 retval = RET_INVALID_FORMAT; in keep_or_remove()
252 reterr = RET_INVALID_FORMAT; in snps_flag()
419 retval = RET_INVALID_FORMAT; in extract_exclude_flag_norange()
650 retval = RET_INVALID_FORMAT; in filter_attrib()
885 retval = RET_INVALID_FORMAT; in filter_attrib_sample()
1013 retval = RET_INVALID_FORMAT; in filter_qual_scores()
1446 retval = RET_INVALID_FORMAT; in load_oblig_missing()
1545 retval = RET_INVALID_FORMAT; in filter_samples_file()
H A Dbgen_to_gen.c452 retval = RET_INVALID_FORMAT; in bgen_to_gen()
H A Dplink_dosage.c468 retval = RET_INVALID_FORMAT; in dosage_load_score_files()
475 retval = RET_INVALID_FORMAT; in dosage_load_score_files()
767 retval = RET_INVALID_FORMAT; in plink1_dosage()
2323 retval = RET_INVALID_FORMAT; in plink1_dosage()
2335 retval = RET_INVALID_FORMAT; in plink1_dosage()
H A Dplink_cluster.c573 retval = RET_INVALID_FORMAT; in load_clusters()
788 retval = RET_INVALID_FORMAT; in extract_clusters()
1280 retval = RET_INVALID_FORMAT; in read_dists()
1452 retval = RET_INVALID_FORMAT; in read_genome()
1459 retval = RET_INVALID_FORMAT; in read_genome()
1953 retval = RET_INVALID_FORMAT; in cluster_enforce_match()
1960 retval = RET_INVALID_FORMAT; in cluster_enforce_match()
H A Ddose2plink.c110 #define RET_INVALID_FORMAT 6 macro
1412 retval = RET_INVALID_FORMAT; in main()
H A Dplink_rserve.c482 retval = RET_INVALID_FORMAT; in rserve_call()
H A Dplink_ld.c1338 retval = RET_INVALID_FORMAT; in ld_prune()
6204 retval = RET_INVALID_FORMAT; in ld_report_regular()
6755 retval = RET_INVALID_FORMAT; in show_tags()
10829 return RET_INVALID_FORMAT; in validate_epistasis_summary_header()
10834 return RET_INVALID_FORMAT; in validate_epistasis_summary_header()
10839 return RET_INVALID_FORMAT; in validate_epistasis_summary_header()
10844 return RET_INVALID_FORMAT; in validate_epistasis_summary_header()
10857 return RET_INVALID_FORMAT; in validate_epistasis_summary_header()
10862 return RET_INVALID_FORMAT; in validate_epistasis_summary_header()
10867 return RET_INVALID_FORMAT; in validate_epistasis_summary_header()
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H A Dplink_common.c673 return RET_INVALID_FORMAT; in scan_token_ct_len()
679 return RET_INVALID_FORMAT; in scan_token_ct_len()
3961 return RET_INVALID_FORMAT; in populate_id_htable()
5501 return RET_INVALID_FORMAT; in sort_item_ids_noalloc()
8180 retval = RET_INVALID_FORMAT; in string_range_list_to_bitarr()
9742 retval = RET_INVALID_FORMAT; in open_and_size_string_list()
9786 return RET_INVALID_FORMAT; in open_and_skip_first_lines()
9794 return RET_INVALID_FORMAT; in open_and_skip_first_lines()
9819 return RET_INVALID_FORMAT; in load_to_first_token()
9836 return RET_INVALID_FORMAT; in load_to_first_token()
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H A Dplink_common.h311 #define RET_INVALID_FORMAT 3 macro
326 #define RET_MALFORMED_INPUT RET_INVALID_FORMAT
H A Dplink_calc.c2673 retval = RET_INVALID_FORMAT; in unrelated_herit_batch()
2678 retval = RET_INVALID_FORMAT; in unrelated_herit_batch()
5962 retval = RET_INVALID_FORMAT; in rel_cutoff_batch()
5966 retval = RET_INVALID_FORMAT; in rel_cutoff_batch()
6358 retval = RET_INVALID_FORMAT; in load_distance_wts()
6955 retval = RET_INVALID_FORMAT; in calc_rel()
H A Dplink.c676 retval = RET_INVALID_FORMAT; in plink()
2155 retval = RET_INVALID_FORMAT; in plink()
2703 retval = RET_INVALID_FORMAT; in rerun()
2830 return RET_INVALID_FORMAT; in alloc_2col()
2835 return RET_INVALID_FORMAT; in alloc_2col()
2849 return RET_INVALID_FORMAT; in alloc_2col()
2858 return RET_INVALID_FORMAT; in alloc_2col()
H A Dplink_family.c447 retval = RET_INVALID_FORMAT; in get_trios_and_families()
1719 return RET_INVALID_FORMAT; in populate_pedigree_rel_info()
H A Dplink_glm.c285 retval = RET_INVALID_FORMAT; in glm_scan_conditions()