/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/libs/search/ |
H A D | agrep-wumanber.c | 171 Rnew[k] = ((R[k] >> 1) & bits) | R[k-1]>>1 | Rnew[k-1]>>1 | R[k-1]; in callback_with_end() 231 tmp = R; R = Rnew; Rnew = tmp; in callback_with_end() 242 free(Rnew); in callback_with_end() 281 free(Rnew); in find_end() 305 free(Rnew); in find_end() 308 tmp = R; R = Rnew; Rnew = tmp; in find_end() 311 free(Rnew); in find_end() 347 free(Rnew); in find_begin() 368 free(Rnew); in find_begin() 372 tmp = R; R = Rnew; Rnew = tmp; in find_begin() [all …]
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/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/libs/search/ |
H A D | agrep-wumanber.c | 171 Rnew[k] = ((R[k] >> 1) & bits) | R[k-1]>>1 | Rnew[k-1]>>1 | R[k-1]; in callback_with_end() 231 tmp = R; R = Rnew; Rnew = tmp; in callback_with_end() 242 free(Rnew); in callback_with_end() 281 free(Rnew); in find_end() 305 free(Rnew); in find_end() 308 tmp = R; R = Rnew; Rnew = tmp; in find_end() 311 free(Rnew); in find_end() 347 free(Rnew); in find_begin() 368 free(Rnew); in find_begin() 372 tmp = R; R = Rnew; Rnew = tmp; in find_begin() [all …]
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/dports/science/qmcpack/qmcpack-3.11.0/src/QMCWaveFunctions/detail/CUDA_legacy/ |
H A D | BsplineJastrowCuda.h | 49 float Rnew[], 61 double Rnew[], 73 float Rnew[], 86 double Rnew[], 242 float Rnew[], 255 double Rnew[], 268 float Rnew[], 281 double Rnew[],
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H A D | BsplineJastrowCudaPBC.h | 54 float Rnew[], 68 double Rnew[], 82 float Rnew[], 98 double Rnew[], 292 float Rnew[], 307 double Rnew[], 322 float Rnew[], 338 double Rnew[],
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H A D | BsplineJastrowCuda.cu | 253 T* Rnew, in two_body_ratio_kernel() argument 331 float Rnew[], in two_body_ratio() argument 353 double Rnew[], in two_body_ratio() argument 488 float Rnew[], in two_body_ratio_grad() argument 511 double Rnew[], in two_body_ratio_grad() argument 1377 myRnew[tid] = Rnew[3 * blockIdx.x + tid]; in one_body_ratio_kernel() 1434 float Rnew[], in one_body_ratio() argument 1457 double Rnew[], in one_body_ratio() argument 1502 myRnew[tid] = Rnew[3 * blockIdx.x + tid]; in one_body_ratio_grad_kernel() 1592 float Rnew[], in one_body_ratio_grad() argument [all …]
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H A D | BsplineJastrowCudaPBC.cu | 818 float Rnew[], in two_body_ratio_PBC() argument 852 double Rnew[], in two_body_ratio_PBC() argument 1108 float Rnew[], in two_body_ratio_grad_PBC() argument 1170 double Rnew[], in two_body_ratio_grad_PBC() argument 2675 float Rnew[], in one_body_ratio_PBC() argument 2711 double Rnew[], in one_body_ratio_PBC() argument 2765 myRnew[0] = Rnew[3 * blockIdx.x]; in one_body_ratio_grad_PBC_kernel() 2766 myRnew[1] = Rnew[3 * blockIdx.x + 1]; in one_body_ratio_grad_PBC_kernel() 2767 myRnew[2] = Rnew[3 * blockIdx.x + 2]; in one_body_ratio_grad_PBC_kernel() 2989 float Rnew[], in one_body_ratio_grad_PBC() argument [all …]
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/dports/science/qmcpack/qmcpack-3.11.0/src/QMCWaveFunctions/tests/ |
H A D | test_MO_spinor.cpp | 149 ParticleSet::ParticlePos_t Rnew; in test_lcao_spinor() local 150 Rnew.resize(1); in test_lcao_spinor() 151 Rnew = elec_.R + dR; in test_lcao_spinor() 152 elec_.R = Rnew; in test_lcao_spinor() 334 ParticleSet::ParticlePos_t Rnew; in test_lcao_spinor_excited() local 335 Rnew.resize(1); in test_lcao_spinor_excited() 336 Rnew = elec_.R + dR; in test_lcao_spinor_excited() 337 elec_.R = Rnew; in test_lcao_spinor_excited()
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H A D | test_einset_spinor.cpp | 357 ParticleSet::ParticlePos_t Rnew; variable 358 Rnew.resize(3); 359 Rnew = elec_.R + dR; 360 elec_.R = Rnew;
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/dports/science/qmcpack/qmcpack-3.11.0/src/Particle/ |
H A D | accept_kernel.cu | 16 __global__ void accept_kernel(T** Rlist, T* Rnew, int* toAccept, int iat, int N, int k) in accept_kernel() argument 25 Rnew_shared[i * BS + tid] = Rnew[(3 * block + i) * BS + tid + 3 * k * N]; in accept_kernel() 73 __global__ void NL_move_kernel(T** Rlist, T* Rnew, int N) in NL_move_kernel() argument 81 Rnew_shared[0][i * BS + threadIdx.x] = Rnew[off]; in NL_move_kernel()
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H A D | MCWalkerConfiguration.h | 96 std::vector<PosType> Rnew; variable 117 …void NLMove_GPU(std::vector<Walker_t*>& walkers, std::vector<PosType>& Rnew, std::vector<int>& iat…
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H A D | MCWalkerConfiguration.cpp | 345 Rnew.resize(nw * kblocksize); in updateLists_GPU() 439 Rnew.resize(nw * kblocksize); in proposeMove_GPU() 450 Rnew[i + offset][dim] = newPos[i][dim]; in proposeMove_GPU()
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/dports/devel/mercurial/mercurial-6.0/tests/ |
H A D | test-convert-authormap.t | 33 $ hg -Rnew log 52 $ hg -Rnew log
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/dports/misc/elki/elki-release0.7.1-1166-gfb1fffdf3/elki-outlier/src/main/java/de/lmu/ifi/dbs/elki/algorithm/outlier/subspace/ |
H A D | AggarwalYuNaive.java | 119 ArrayList<int[]> Rnew = new ArrayList<>(); in run() local 135 Rnew.add(neu); in run() 139 Rk = Rnew; in run()
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/dports/math/octave-forge-secs1d/secs1d-0.0.9/bak/DDG/ |
H A D | DDGnlpoisson.m | 163 Rnew = L * Vnew + T0; variable 168 Rnew(BCnodes) = []; 170 if ((dit>1)&(norm(Rnew,inf)>=norm(R,inf))) 177 R = Rnew;
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/dports/math/octave-forge-secs1d/secs1d-0.0.9/inst/ |
H A D | secs1d_nlpoisson_newton.m | 103 Rnew = L * Vnew + N; variable 105 normrnew = norm (Rnew(2:end-1), inf); 110 R = Rnew;
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/dports/science/dalton/dalton-66052b3af5ea7225e31178bf9a8b031913c72190/external/pelib/src/ |
H A D | pelib_potential_derivatives.F90 | 637 real(rp) :: Rold, Rnew, alpha_i, alpha_m, v local 652 Rnew = nrm2(Rmi) 653 if (Rnew <= Rold) then 654 Rold = Rnew
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/dports/math/cocoalib/CoCoALib-0.99712/src/CoCoA-5/packages/ |
H A D | TypeVectors.cpkg5 | 349 Rnew := []; 350 Append(ref Rnew,[I+1 | I In Rold[1]]); 353 Append(ref Rnew,Sorted(Concat(Rold[J],[I+1|I In Rold[J+1]]))); 356 Append(ref Rnew,Sorted(Concat(Rold[Len(Rold)],[1]))); 357 Return Rnew;
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/dports/math/giacxcas/CoCoALib-0.99700/src/CoCoA-5/packages/ |
H A D | TypeVectors.cpkg5 | 349 Rnew := []; 350 Append(ref Rnew,[I+1 | I In Rold[1]]); 353 Append(ref Rnew,Sorted(Concat(Rold[J],[I+1|I In Rold[J+1]]))); 356 Append(ref Rnew,Sorted(Concat(Rold[Len(Rold)],[1]))); 357 Return Rnew;
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/dports/misc/vxl/vxl-3.3.2/contrib/brl/bseg/bvxm/breg3d/ |
H A D | breg3d_ekf_camera_optimizer.cxx | 318 vnl_matrix_fixed<double,3,3> Rnew = dRT.extract(3,3)*R_prev; in optimize_once() local 320 vnl_matrix_fixed<double,3,1> Cnew = -Rnew.transpose()*Tnew; in optimize_once() 323 vgl_rotation_3d<double> curr_rot(Rnew); in optimize_once()
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/dports/science/qmcpack/qmcpack-3.11.0/src/QMCWaveFunctions/Fermion/ |
H A D | DiracDeterminantCUDA.cpp | 865 Phi->evaluate(walkers, W.Rnew, newRowList_d); in ratio() 894 int N = W.Rnew.size(); in ratio() 948 W.Rnew, in ratio() 959 Phi->evaluate(walkers, W.Rnew, newRowList_d, newGradLaplList_d, RowStride); in ratio() 969 P.R[iat - FirstIndex] = W.Rnew[iw]; in ratio() 1052 … %i, kcurr: %i, kstart: %i, nw: %i, Rnew size: %lu\n", k, W.getkcurr(), kstart, nw, W.Rnew.size()); in calcRatio() 1095 Phi->evaluate(walkers, W.Rnew, newRowList_d, newGradLaplList_d, RowStride, k, W.getklinear()); in calcRatio() 1116 P.R[iat - FirstIndex] = W.Rnew[iw]; in calcRatio()
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/dports/devel/smv/smv/ |
H A D | symbols.c | 3494 mygarbage(); release_bdd(Rnew); 3497 Rnew = save_bdd(not_bdd(collapse_vars(Rnew,trans_1,prime_vars1))); 3499 mygarbage(); release_bdd(Rnew); 3500 Rnew = save_bdd(and_bdd(Rnew,r_shift(invar))); 3502 mygarbage(); release_bdd(Rnew); 3504 Rnew = save_bdd(not_bdd(collapse_no_shift(Rnew,trans))); 3506 mygarbage(); release_bdd(Rnew); 3507 Rnew = save_bdd(and_bdd(Rnew,R)); 3510 if(Rnew != R){ 3512 res = check_hom(Rnew,R,n+1); [all …]
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/dports/astro/gpstk/GPSTk-8.0.0/ext/lib/Geomatics/ |
H A D | SRI.cpp | 734 Matrix<double> Rnew(n-1,n-1,0.0); in stateFixAndRemove() local 743 Rnew(ii,jj) = R(i,j); in stateFixAndRemove() 748 R = Rnew; in stateFixAndRemove()
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/dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/src/hotspot/cpu/sparc/ |
H A D | sparc.ad | 2783 Register Rnew = reg_to_register_object($new$$reg); 2785 __ cas_ptr(Rmem, Rold, Rnew); // Swap(*Rmem,Rnew) if *Rmem == Rold 2786 __ cmp( Rold, Rnew ); 2792 Register Rnew = reg_to_register_object($new$$reg); 2795 __ mov(Rnew, O7); 2804 Register Rnew = reg_to_register_object($new$$reg); 2807 __ mov(Rnew, O7); 2816 Register Rnew = reg_to_register_object($new$$reg); 2819 __ cas(Rmem, Rold, Rnew); 2826 Register Rnew = reg_to_register_object($new$$reg); [all …]
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/dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/src/hotspot/cpu/sparc/ |
H A D | sparc.ad | 2784 Register Rnew = reg_to_register_object($new$$reg); 2786 __ cas_ptr(Rmem, Rold, Rnew); // Swap(*Rmem,Rnew) if *Rmem == Rold 2787 __ cmp( Rold, Rnew ); 2793 Register Rnew = reg_to_register_object($new$$reg); 2796 __ mov(Rnew, O7); 2805 Register Rnew = reg_to_register_object($new$$reg); 2808 __ mov(Rnew, O7); 2817 Register Rnew = reg_to_register_object($new$$reg); 2820 __ cas(Rmem, Rold, Rnew); 2827 Register Rnew = reg_to_register_object($new$$reg); [all …]
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/dports/java/openjdk11-jre/jdk11u-jdk-11.0.13-8-1/src/hotspot/cpu/sparc/ |
H A D | sparc.ad | 2783 Register Rnew = reg_to_register_object($new$$reg); 2785 __ cas_ptr(Rmem, Rold, Rnew); // Swap(*Rmem,Rnew) if *Rmem == Rold 2786 __ cmp( Rold, Rnew ); 2792 Register Rnew = reg_to_register_object($new$$reg); 2795 __ mov(Rnew, O7); 2804 Register Rnew = reg_to_register_object($new$$reg); 2807 __ mov(Rnew, O7); 2816 Register Rnew = reg_to_register_object($new$$reg); 2819 __ cas(Rmem, Rold, Rnew); 2826 Register Rnew = reg_to_register_object($new$$reg); [all …]
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