Searched refs:SATupleAndPos (Results 1 – 3 of 3) sorted by relevance
/dports/biology/bowtie2/bowtie2-2.4.4/ |
H A D | aligner_sw_driver.h | 156 struct SATupleAndPos { struct 164 bool operator<(const SATupleAndPos& o) const { argument 170 bool operator==(const SATupleAndPos& o) const { 192 const EList<SATupleAndPos, 16>& salist, in init() argument 495 EList<SATupleAndPos, 16> satpos_; // holds SATuple, SeedPos pairs 496 EList<SATupleAndPos, 16> satpos2_; // holds SATuple, SeedPos pairs
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H A D | aligner_sw_driver.cpp | 519 EList<SATupleAndPos, 16>& satpos = keepWhole ? satpos_ : satpos2_; in prioritizeSATups()
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/dports/biology/hisat2/hisat2-2.2.1/ |
H A D | aligner_sw_driver.h | 166 struct SATupleAndPos { struct 174 bool operator<(const SATupleAndPos& o) const { argument 180 bool operator==(const SATupleAndPos& o) const { 203 const EList<SATupleAndPos<index_t>, 16>& salist, in init() 507 EList<SATupleAndPos<index_t>, 16> satpos_; // holds SATuple, SeedPos pairs 508 EList<SATupleAndPos<index_t>, 16> satpos2_; // holds SATuple, SeedPos pairs 1042 EList<SATupleAndPos<index_t>, 16>& satpos = keepWhole ? satpos_ : satpos2_; in prioritizeSATups()
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