Searched refs:SMapRange (Results 1 – 2 of 2) sorted by relevance
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/gnomon/ |
| H A D | gnomon_model.hpp | 627 m_orig_ranges.push_back(SMapRange(SMapRangeEdge(orig_a), SMapRangeEdge(orig_b), kEmptyStr)); in CAlignMap()
682 class SMapRange { class in CAlignMap
684 …SMapRange(SMapRangeEdge from, SMapRangeEdge to, const string& mism) : m_from(from), m_to(to), m_mi… in SMapRange() function in CAlignMap::SMapRange
704 bool operator<(const SMapRange& mr) const { in operator <()
717 …tatic TSignedSeqPos MapAtoB(const vector<CAlignMap::SMapRange>& a, const vector<CAlignMap::SMapRan…
718 …SignedSeqRange MapRangeAtoB(const vector<CAlignMap::SMapRange>& a, const vector<CAlignMap::SMapRan…
719 …SignedSeqRange MapRangeAtoB(const vector<CAlignMap::SMapRange>& a, const vector<CAlignMap::SMapRan… in MapRangeAtoB()
722 static int FindLowerRange(const vector<CAlignMap::SMapRange>& a, TSignedSeqPos p);
727 vector<SMapRange> m_orig_ranges, m_edited_ranges;
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/gnomon/ |
| H A D | gnomon_seq.cpp | 402 m_orig_ranges.push_back(SMapRange(orig_from, orig_to, kEmptyStr)); in InsertOneToOneRange()
408 m_edited_ranges.push_back(SMapRange(edited_from, edited_to, mism)); in InsertOneToOneRange()
670 int CAlignMap::FindLowerRange(const vector<CAlignMap::SMapRange>& a, TSignedSeqPos p) { in FindLowerRange()
671 … int num = lower_bound(a.begin(), a.end(), CAlignMap::SMapRange(p+1, p+1, kEmptyStr))-a.begin()-1; in FindLowerRange()
826 …edSeqPos CAlignMap::MapAtoB(const vector<CAlignMap::SMapRange>& a, const vector<CAlignMap::SMapRan… in MapAtoB()
896 …nge CAlignMap::MapRangeAtoB(const vector<CAlignMap::SMapRange>& a, const vector<CAlignMap::SMapRan… in MapRangeAtoB()
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