| /dports/biology/ncbi-toolkit/ncbi/tools/ |
| H A D | salptool.c | 562 …nPtr) AsnIoMemCopy((Pointer)align_1, (AsnReadFunc)SeqAlignAsnRead, (AsnWriteFunc)SeqAlignAsnWrite); in MergeTwoDspBySIM4()
576 …nPtr) AsnIoMemCopy((Pointer)align_2, (AsnReadFunc)SeqAlignAsnRead, (AsnWriteFunc)SeqAlignAsnWrite); in MergeTwoDspBySIM4()
1754 …eqAlignPtr) AsnIoMemCopy (salp, (AsnReadFunc) SeqAlignAsnRead, (AsnWriteFunc) SeqAlignAsnWrite); in CutAlignmentAtGaps()
1774 …eqAlignPtr) AsnIoMemCopy (salp, (AsnReadFunc) SeqAlignAsnRead, (AsnWriteFunc) SeqAlignAsnWrite); in CutAlignmentAtGaps()
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| H A D | blfmtutl.c | 790 … new_head = AsnIoMemCopy(sap, (AsnReadFunc) SeqAlignAsnRead, (AsnWriteFunc) SeqAlignAsnWrite); in GetPrivateSeqAlign()
795 … var->next = AsnIoMemCopy(sap, (AsnReadFunc) SeqAlignAsnRead, (AsnWriteFunc) SeqAlignAsnWrite); in GetPrivateSeqAlign()
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| H A D | actutils.c | 3138 SeqAlignAsnWrite (salp, aip, NULL); in DumpAlignments()
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| /dports/biology/ncbi-toolkit/ncbi/object/ |
| H A D | objalign.h | 230 NLM_EXTERN Boolean LIBCALL SeqAlignAsnWrite PROTO((SeqAlignPtr anp, AsnIoPtr aip, AsnTypePtr at…
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| H A D | objalign.c | 187 return SeqAlignAsnWrite((SeqAlignPtr)data, aip, atp); in SeqAlignAsnWriteFunc()
387 NLM_EXTERN Boolean LIBCALL SeqAlignAsnWrite (SeqAlignPtr sap, AsnIoPtr aip, AsnTypePtr orig) in SeqAlignAsnWrite() function
1714 if (! SeqAlignAsnWrite(sap, aip, atp)) in SeqAlignSetAsnWrite()
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| H A D | objseq.c | 2552 if (! SeqAlignAsnWrite((SeqAlignPtr)pnt, aip, NUM_REF_aligns)) goto erret; in NumberingAsnWrite()
3873 if (! SeqAlignAsnWrite(sap, aip, SEQ_HIST_assembly_E)) goto erret; in SeqHistAsnWrite()
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| /dports/biology/ncbi-toolkit/ncbi/biostruc/cblast/ |
| H A D | cblastutil.c | 453 … salp_head = AsnIoMemCopy(salp_tmp, (AsnReadFunc)SeqAlignAsnRead, (AsnWriteFunc)SeqAlignAsnWrite); in CblastAlgTruncate()
457 …p_new->next = AsnIoMemCopy(salp_tmp, (AsnReadFunc)SeqAlignAsnRead, (AsnWriteFunc)SeqAlignAsnWrite); in CblastAlgTruncate()
489 … salp_head = AsnIoMemCopy(salp_tmp, (AsnReadFunc)SeqAlignAsnRead, (AsnWriteFunc)SeqAlignAsnWrite); in CblastAlgTruncateAndExtend()
493 …p_new->next = AsnIoMemCopy(salp_tmp, (AsnReadFunc)SeqAlignAsnRead, (AsnWriteFunc)SeqAlignAsnWrite); in CblastAlgTruncateAndExtend()
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| /dports/biology/ncbi-toolkit/ncbi/api/ |
| H A D | pgppop.c | 3832 …eqAlignPtr) AsnIoMemCopy (salp, (AsnReadFunc) SeqAlignAsnRead, (AsnWriteFunc) SeqAlignAsnWrite); in PrintSeqAlignCallback()
3850 …eqAlignPtr) AsnIoMemCopy (salp, (AsnReadFunc) SeqAlignAsnRead, (AsnWriteFunc) SeqAlignAsnWrite); in PrintSeqAlignCallback()
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| H A D | alignmgr2.c | 5662 SeqAlignAsnWrite(sap, aip, NULL); in AlnMgr2DumpIndexedAlnToFile()
5671 SeqAlignAsnWrite(amaip->sharedaln, aip, NULL); in AlnMgr2DumpIndexedAlnToFile()
5678 SeqAlignAsnWrite(sap_tmp, aip, NULL); in AlnMgr2DumpIndexedAlnToFile()
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| /dports/biology/ncbi-toolkit/ncbi/ddv/ |
| H A D | ddvpanel.c | 2468 SeqAlignAsnWrite( sap, aip, atp ); in DDV_ExportSeqAlign()
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| /dports/biology/ncbi-toolkit/ncbi/network/id2arch/ |
| H A D | id2sgen.c | 3289 …AsnGenericUserSeqOfAsnWrite(ptr -> assembly, (AsnWriteFunc) SeqAlignAsnWrite, aip, ID2S_CHUNK_DATA… in ID2SChunkDataAsnWrite()
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| /dports/biology/ncbi-toolkit/ncbi/network/blast3/client/ |
| H A D | objblst3.c | 3465 if ( ! SeqAlignAsnWrite(ptr -> align, aip, BLAST_SEQUENCE_align)) { in BlastSequenceAsnWrite()
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| /dports/biology/ncbi-toolkit/ncbi/desktop/ |
| H A D | saled.c | 3425 (AsnWriteFunc) SeqAlignAsnWrite); in ReadAlignmentForSeqEntry()
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| /dports/biology/ncbi-toolkit/ncbi/sequin/ |
| H A D | sequin4.c | 3117 (AsnWriteFunc) SeqAlignAsnWrite); in UpdateSeqAlignForSeqEntry()
3606 (AsnWriteFunc) SeqAlignAsnWrite); in FixOneAlignmentOverGaps()
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| H A D | sequin9.c | 7703 SeqAlignAsnWrite (udp->salp, aip, NULL); in PrintTAln()
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| H A D | sequin8.c | 10716 …qAlignPtr) AsnIoMemCopy (ai->salp, (AsnReadFunc) SeqAlignAsnRead, (AsnWriteFunc) SeqAlignAsnWrite); in AssemblyAlignmentIntervalResolutionDialogToSeqAlign()
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