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Searched refs:SurfaceMesh (Results 1 – 25 of 39) sorted by relevance

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/dports/science/apbs/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/gamer/src/biom/gamer/
H A Dbiom.h151 }SurfaceMesh; typedef
271 SurfaceMesh* SurfaceMesh_readOFF(char* filename);
272 SurfaceMesh* SurfaceMesh_readPDB(char* filename);
273 SurfaceMesh* SurfaceMesh_sphere(int);
280 void SurfaceMesh_dtor(SurfaceMesh* surfmesh);
283 void SurfaceMesh_releaseData(SurfaceMesh* surfmesh);
294 void SurfaceMesh_refine(SurfaceMesh* surfmesh);
297 void SurfaceMesh_normalSmooth(SurfaceMesh* surfmesh);
301 SurfaceMesh* SurfaceMesh_merge(SurfaceMesh*, SurfaceMesh*);
307 void SurfaceMesh_centeralize(SurfaceMesh* surfmesh);
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/dports/science/apbs/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/gamer/swig/src/
H A Dpost.i19 static FLTVECT* _Vertex_getitem(SurfaceMesh* surfmesh, unsigned int i){ in _Vertex_getitem()
23 static INT3VECT* _Face_getitem(SurfaceMesh* surfmesh, unsigned int i){ in _Face_getitem()
46 %extend SurfaceMesh {
49 SurfaceMesh(unsigned int num_vertices, unsigned int num_faces) in SurfaceMesh() function
55 SurfaceMesh(unsigned int level) in SurfaceMesh() function
61 SurfaceMesh(char* filename) in SurfaceMesh() function
84 SurfaceMesh(char* segmentation_filename, float isovalue, bool padd) in SurfaceMesh() function
90 SurfaceMesh(char* segmentation_filename, char* intensity_filename, in SurfaceMesh() function
98 SurfaceMesh(SurfaceMesh* in0, SurfaceMesh* in1) in SurfaceMesh() function
104 ~SurfaceMesh() in ~SurfaceMesh()
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H A Dbiom.i116 }SurfaceMesh; typedef
209 void SurfaceMesh_resetVertexMarkers(SurfaceMesh* surfmesh);
210 void SurfaceMesh_resetFaceMarkers(SurfaceMesh* surfmesh);
211 void SurfaceMesh_refine(SurfaceMesh*);
212 bool SurfaceMesh_smooth(SurfaceMesh* surfmesh,
217 void SurfaceMesh_normalSmooth(SurfaceMesh* surfmesh);
218 char SurfaceMesh_coarse(SurfaceMesh* surfmesh, float coarse_rate,
221 ATOM SurfaceMesh_getCenterRadius(SurfaceMesh* surfmesh);
224 void SurfaceMesh_correctNormals(SurfaceMesh* surfmesh);
225 void SurfaceMesh_writeOFF(SurfaceMesh* surfmesh, char* filename);
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H A Dgamer_typemaps.i38 %typemap(in, numinputs=0) SurfaceMesh*& (SurfaceMesh* tmp_mesh)
43 %typemap(argout) SurfaceMesh*&
45 $result = SWIG_NewPointerObj(SWIG_as_voidptr(*$1), $descriptor(SurfaceMesh*), 1 );
48 %typemap(in, numinputs=0) SurfaceMesh** (SurfaceMesh* tmp_mesh)
53 %typemap(argout) SurfaceMesh**
55 $result = SWIG_NewPointerObj(SWIG_as_voidptr(*$1), $descriptor(SurfaceMesh*), 1 );
H A D__init__.py13 SurfaceMesh = cgamer.SurfaceMesh variable
/dports/math/cgal/CGAL-5.3/examples/Surface_mesh_parameterization/
H A Ddiscrete_authalic.cpp21 typedef CGAL::Surface_mesh<Kernel::Point_3> SurfaceMesh; typedef
23 typedef boost::graph_traits<SurfaceMesh>::halfedge_descriptor halfedge_descriptor;
24 typedef boost::graph_traits<SurfaceMesh>::vertex_descriptor vertex_descriptor;
25 typedef boost::graph_traits<SurfaceMesh>::face_descriptor face_descriptor;
33 SurfaceMesh sm; in main()
44 typedef SurfaceMesh::Property_map<vertex_descriptor, Point_2> UV_pmap; in main()
47 typedef SMP::Circular_border_arc_length_parameterizer_3<SurfaceMesh> Border_parameterizer; in main()
48 typedef SMP::Discrete_authalic_parameterizer_3<SurfaceMesh, Border_parameterizer> Parameterizer; in main()
H A Dorbifold.cpp26 typedef CGAL::Surface_mesh<Kernel::Point_3> SurfaceMesh; typedef
28 typedef boost::graph_traits<SurfaceMesh>::vertex_descriptor SM_vertex_descriptor;
29 typedef boost::graph_traits<SurfaceMesh>::halfedge_descriptor SM_halfedge_descriptor;
30 typedef boost::graph_traits<SurfaceMesh>::edge_descriptor SM_edge_descriptor;
32 typedef SurfaceMesh::Property_map<SM_edge_descriptor, bool> Seam_edge_pmap;
33 typedef SurfaceMesh::Property_map<SM_vertex_descriptor, bool> Seam_vertex_pmap;
35 typedef CGAL::Seam_mesh<SurfaceMesh, Seam_edge_pmap, Seam_vertex_pmap> Mesh;
39 typedef SurfaceMesh::Property_map<SM_halfedge_descriptor, Point_2> UV_pmap;
50 SurfaceMesh sm; in main()
65 SMP::read_cones<SurfaceMesh>(sm, cone_filename, std::back_inserter(cone_sm_vds)); in main()
H A Dlscm.cpp21 typedef CGAL::Surface_mesh<Kernel::Point_3> SurfaceMesh; typedef
23 typedef boost::graph_traits<SurfaceMesh>::edge_descriptor SM_edge_descriptor;
24 typedef boost::graph_traits<SurfaceMesh>::halfedge_descriptor SM_halfedge_descriptor;
25 typedef boost::graph_traits<SurfaceMesh>::vertex_descriptor SM_vertex_descriptor;
27 typedef SurfaceMesh::Property_map<SM_halfedge_descriptor, Point_2> UV_pmap;
28 typedef SurfaceMesh::Property_map<SM_edge_descriptor, bool> Seam_edge_pmap;
29 typedef SurfaceMesh::Property_map<SM_vertex_descriptor, bool> Seam_vertex_pmap;
31 typedef CGAL::Seam_mesh<SurfaceMesh, Seam_edge_pmap, Seam_vertex_pmap> Mesh;
43 SurfaceMesh sm; in main()
H A Dsimple_parameterization.cpp16 typedef CGAL::Surface_mesh<Kernel::Point_3> SurfaceMesh; typedef
18 typedef boost::graph_traits<SurfaceMesh>::vertex_descriptor vertex_descriptor;
19 typedef boost::graph_traits<SurfaceMesh>::halfedge_descriptor halfedge_descriptor;
20 typedef boost::graph_traits<SurfaceMesh>::face_descriptor face_descriptor;
28 SurfaceMesh sm; in main()
39 typedef SurfaceMesh::Property_map<vertex_descriptor, Point_2> UV_pmap; in main()
/dports/science/apbs/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/gamer/src/biom/
H A DSurfaceMesh.C46 SurfaceMesh* surfmesh= (SurfaceMesh*)malloc(sizeof(SurfaceMesh)); in SurfaceMesh_ctor()
73 void SurfaceMesh_dtor(SurfaceMesh* surfmesh) in SurfaceMesh_dtor()
91 void SurfaceMesh_releaseData(SurfaceMesh* surfmesh) in SurfaceMesh_releaseData()
115 void SurfaceMesh_createVertexMarkers(SurfaceMesh* surfmesh) in SurfaceMesh_createVertexMarkers()
148 void SurfaceMesh_resetVertexMarkers(SurfaceMesh* surfmesh) in SurfaceMesh_resetVertexMarkers()
171 void SurfaceMesh_createFaceMarkers(SurfaceMesh* surfmesh) in SurfaceMesh_createFaceMarkers()
188 void SurfaceMesh_destroyFaceMarkers(SurfaceMesh* surfmesh) in SurfaceMesh_destroyFaceMarkers()
204 void SurfaceMesh_resetFaceMarkers(SurfaceMesh* surfmesh) in SurfaceMesh_resetFaceMarkers()
226 void SurfaceMesh_createNeighborlist(SurfaceMesh* surfmesh) in SurfaceMesh_createNeighborlist()
367 ATOM SurfaceMesh_getCenterRadius(SurfaceMesh* surfmesh) in SurfaceMesh_getCenterRadius()
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H A DSurfSmooth.C37 void MoveVerticesSurfaceOnly(SurfaceMesh *, int);
38 FLTVECT GetNormals(SurfaceMesh *, int);
42 void EdgeFlipping(SurfaceMesh *, int);
43 float GetDotProduct(SurfaceMesh *,int, int, int);
46 void NormalSmooth(SurfaceMesh *, int);
47 FLTVECT GetNormals(SurfaceMesh *, int,int,int);
58 void GenerateHistogram(SurfaceMesh *surfmesh) in GenerateHistogram()
108 bool SurfaceMesh_smooth(SurfaceMesh *surfmesh, in SurfaceMesh_smooth()
265 char SurfaceMesh_coarse(SurfaceMesh* surfmesh, in SurfaceMesh_coarse()
683 void PolygonSubdivision(SurfaceMesh *surfmesh, in PolygonSubdivision()
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H A DSurfExtract.C48 void SurfaceExtract(TeTraMesh* volmesh, SurfaceMesh* surfmesh) in SurfaceExtract()
275 SurfaceMesh * SurfaceMesh_merge(SurfaceMesh *surfmesh_in0, SurfaceMesh *surfmesh_in1) in SurfaceMesh_merge()
277 SurfaceMesh *surfmesh; in SurfaceMesh_merge()
H A DReadLattice.C325 SurfaceMesh* SurfaceMesh_readLattice(char* segmentation_filename, in SurfaceMesh_readLattice()
344 SurfaceMesh* SurfaceMesh_readLattice(char* segmentation_filename, in SurfaceMesh_readLattice()
357 SurfaceMesh* surfmesh; in SurfaceMesh_readLattice()
H A DSurfRefine.C45 void SurfaceMesh_refine(SurfaceMesh* surfmesh) in SurfaceMesh_refine()
56 SurfaceMesh* surfmesh_refine; in SurfaceMesh_refine()
H A DMakefile.am21 … GenerateSphereMesh.C SurfExtract.C SurfRefine.C ReadPDB.C PDB2Mesh.C RegionGrowing.C SurfaceMesh.C
H A DGenerateSphereMesh.C54 SurfaceMesh* SurfaceMesh_sphere(int level) in SurfaceMesh_sphere()
64 SurfaceMesh *surfmesh; in SurfaceMesh_sphere()
/dports/cad/meshlab/meshlab-Meshlab-2020.05/src/plugins_experimental/filter_multiscale_align/lib/Patate/common/surface_mesh/
H A DsurfaceMesh.h46 class SurfaceMesh
905 inline SurfaceMesh& assign(const SurfaceMesh& rhs);
1785 SurfaceMesh::
1786 SurfaceMesh() in SurfaceMesh() function
1805 SurfaceMesh::
1814 SurfaceMesh&
1815 SurfaceMesh::
1848 SurfaceMesh&
1849 SurfaceMesh::
1919 SurfaceMesh::
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/dports/science/liggghts/LIGGGHTS-PUBLIC-3.8.0-26-g6e873439/src/
H A Dsurface_mesh_I.h56 SurfaceMesh<NUM_NODES,NUM_NEIGH_MAX>::SurfaceMesh(LAMMPS *lmp) in SurfaceMesh() function
94 SurfaceMesh<NUM_NODES,NUM_NEIGH_MAX>::~SurfaceMesh() in ~SurfaceMesh()
136 void SurfaceMesh<NUM_NODES,NUM_NEIGH_MAX>::deleteElement(int n) in deleteElement()
146 void SurfaceMesh<NUM_NODES,NUM_NEIGH_MAX>::refreshOwned(int setupFlag) in refreshOwned()
167 void SurfaceMesh<NUM_NODES,NUM_NEIGH_MAX>::recalcLocalSurfProperties() in recalcLocalSurfProperties()
454 void SurfaceMesh<NUM_NODES,NUM_NEIGH_MAX>::buildNeighbours() in buildNeighbours()
564 void SurfaceMesh<NUM_NODES,NUM_NEIGH_MAX>::qualityCheck() in qualityCheck()
1225 void SurfaceMesh<NUM_NODES,NUM_NEIGH_MAX>::scale(double factor) in scale()
1261 bool SurfaceMesh<NUM_NODES,NUM_NEIGH_MAX>::isPlanar() in isPlanar()
1313 int SurfaceMesh<NUM_NODES,NUM_NEIGH_MAX>::n_active_edges(int i) in n_active_edges()
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H A Dsurface_mesh.h68 class SurfaceMesh : public TrackingMesh<NUM_NODES>
157 SurfaceMesh(LAMMPS *lmp);
158 virtual ~SurfaceMesh();
H A Dtri_mesh.h67 typedef SurfaceMesh<3,5> SurfaceMeshBase;
/dports/science/apbs/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/gamer/swig/test/
H A Dgamer_test.py4 sm = SurfaceMesh("single-TT.off")
15 sm = SurfaceMesh("1CID.pdb")
30 outer = SurfaceMesh(4)
37 merged = SurfaceMesh(sm, outer)
/dports/science/axom/axom-0.6.1/src/axom/quest/detail/inout/
H A DMeshWrapper.hpp53 using SurfaceMesh = mint::Mesh; typedef in axom::quest::SimplexMeshWrapper
84 SimplexMeshWrapper(SurfaceMesh*& meshPtr) in SimplexMeshWrapper()
268 SurfaceMesh*& m_surfaceMesh; // ref to pointer to allow changing the mesh
291 using Base::SurfaceMesh;
302 MeshWrapper(SurfaceMesh*& meshPtr) : Base(meshPtr) { } in MeshWrapper()
477 using Base::SurfaceMesh;
488 MeshWrapper(SurfaceMesh*& meshPtr) : Base(meshPtr) { } in MeshWrapper()
/dports/cad/meshlab/meshlab-Meshlab-2020.05/src/plugins_experimental/filter_multiscale_align/lib/Patate/Vitelotte/Core/
H A DvgMesh.hpp39 : PatateCommon::SurfaceMesh(other) in VGMesh()
53 PatateCommon::SurfaceMesh::operator=(rhs); in operator =()
70 PatateCommon::SurfaceMesh::assign(rhs); in assign()
103 PatateCommon::SurfaceMesh::reserve(nvertices, nedges, nfaces); in reserve()
116 PatateCommon::SurfaceMesh::clear(); in clear()
131 PatateCommon::SurfaceMesh::garbageCollection(GC_DONT_RELEASE_INDEX_MAPS); in garbageCollection()
220 PatateCommon::SurfaceMesh::releaseGCIndexMaps(); in releaseGCIndexMaps()
228 PatateCommon::SurfaceMesh::Vertex
237 Vertex v = PatateCommon::SurfaceMesh::addVertex(); in addVertex()
H A DvgMesh.h49 class VGMesh: public PatateCommon::SurfaceMesh
256 using PatateCommon::SurfaceMesh::gcMap;
272 using PatateCommon::SurfaceMesh::isValid;
444 using PatateCommon::SurfaceMesh::isDeleted;
/dports/science/apbs/apbs-pdb2pqr-apbs-1.5-102-g500c1473/apbs/externals/fetk/gamer/tools/ImproveSurfMesh/
H A DImproveSurfMesh.C453 SurfaceMesh* ReadSurfMeshFile(char* input_name, bool read_suffix_count, in ReadSurfMeshFile()
463 SurfaceMesh* surfmesh; in ReadSurfMeshFile()
511 SurfaceMesh* surfmesh = NULL; in ImproveSurfaceMesh()

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