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Searched refs:TContainer (Results 1 – 25 of 235) sorted by relevance

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/dports/biology/seqan1/seqan-1.3.1/seqan/basic/
H A Dbasic_iterator_base.h73 IsSameType<typename RemoveConst_<TContainer>::Type, TContainer>::VALUE,
74 TContainer const,
125 Value<TContainer>
130 Value<TContainer>
140 GetValue<TContainer>
145 GetValue<TContainer>
155 Reference<TContainer>
160 Reference<TContainer>
173 typedef TContainer Type;
178 typedef TContainer Type;
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H A Dbasic_iterator_position.h61 template <typename TContainer>
127 template <typename TContainer>
134 template <typename TContainer>
143 template <typename TContainer>
156 template <typename TContainer>
163 template <typename TContainer>
184 template <typename TContainer>
191 template <typename TContainer>
251 template <typename TContainer>
264 template <typename TContainer>
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H A Dbasic_iterator_adapt_std.h104 template <typename TContainer>
139 template <typename TContainer>
145 template <typename TContainer>
156 template <typename TContainer>
162 template <typename TContainer>
212 template <typename TContainer>
225 template <typename TContainer>
238 template <typename TContainer>
251 template <typename TContainer>
264 template <typename TContainer>
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H A Dbasic_iterator_adaptor.h72 class Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
75 typename Pointer_<TContainer>::Type data_container;
180 inline typename Parameter_<TContainer>::Type
184 return _toParameter<TContainer>(me.data_container);
187 inline typename Parameter_<TContainer>::Type
191 return _toParameter<TContainer>(me.data_container);
197 setContainer(Iter<TContainer, AdaptorIterator<TIterator, TSpec> > & me, typename Parameter_<TContai…
432 inline Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
441 inline Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
450 inline Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
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/dports/biology/seqan/seqan-library-2.4.0/include/seqan/basic/
H A Diterator_base.h96 IsSameType<typename RemoveConst_<TContainer>::Type, TContainer>::VALUE,
97 TContainer const,
167 Value<TContainer>
173 Value<TContainer>
183 GetValue<TContainer>
189 GetValue<TContainer>
199 Reference<TContainer>
205 Reference<TContainer>
229 typedef TContainer Type;
235 typedef TContainer Type;
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H A Diterator_adapt_std.h110 template <typename TContainer>
196 template <typename TContainer>
203 template <typename TContainer>
215 template <typename TContainer>
222 template <typename TContainer>
234 template <typename TContainer>
241 template <typename TContainer>
245 template <typename TContainer>
253 template <typename TContainer>
284 template <typename TContainer>
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H A Diterator_position.h80 template <typename TContainer>
143 template <typename TContainer>
144 struct Size<Iter<TContainer, PositionIterator> > : Size<TContainer> {};
146 template <typename TContainer>
147 struct Position<Iter<TContainer, PositionIterator> > : Position<TContainer> {};
149 template <typename TContainer>
150 struct Difference<Iter<TContainer, PositionIterator> > : Difference<TContainer> {};
153 struct Value<Iter<TContainer, PositionIterator> > : Value<TContainer> {};
156 struct GetValue<Iter<TContainer, PositionIterator> > : GetValue<TContainer> {};
159 struct Reference<Iter<TContainer, PositionIterator> > : Reference<TContainer> {};
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H A Diterator_adaptor.h89 class Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
92 typename Pointer_<TContainer>::Type data_container;
266 inline TContainer &
269 return _referenceCast<TContainer &>(me.data_container);
273 inline TContainer &
573 inline Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
582 inline Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
590 inline Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
716 typedef Iter<TContainer, TSpec> TIter;
718 TContainer &cont = container(iter);
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/basic/
H A Diterator_base.h96 IsSameType<typename RemoveConst_<TContainer>::Type, TContainer>::VALUE,
97 TContainer const,
167 Value<TContainer>
173 Value<TContainer>
183 GetValue<TContainer>
189 GetValue<TContainer>
199 Reference<TContainer>
205 Reference<TContainer>
229 typedef TContainer Type;
235 typedef TContainer Type;
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H A Diterator_adapt_std.h110 template <typename TContainer>
196 template <typename TContainer>
203 template <typename TContainer>
215 template <typename TContainer>
222 template <typename TContainer>
234 template <typename TContainer>
241 template <typename TContainer>
245 template <typename TContainer>
253 template <typename TContainer>
284 template <typename TContainer>
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H A Diterator_position.h80 template <typename TContainer>
143 template <typename TContainer>
144 struct Size<Iter<TContainer, PositionIterator> > : Size<TContainer> {};
146 template <typename TContainer>
147 struct Position<Iter<TContainer, PositionIterator> > : Position<TContainer> {};
149 template <typename TContainer>
150 struct Difference<Iter<TContainer, PositionIterator> > : Difference<TContainer> {};
153 struct Value<Iter<TContainer, PositionIterator> > : Value<TContainer> {};
156 struct GetValue<Iter<TContainer, PositionIterator> > : GetValue<TContainer> {};
159 struct Reference<Iter<TContainer, PositionIterator> > : Reference<TContainer> {};
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H A Diterator_adaptor.h89 class Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
92 typename Pointer_<TContainer>::Type data_container;
266 inline TContainer &
269 return _referenceCast<TContainer &>(me.data_container);
273 inline TContainer &
573 inline Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
582 inline Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
590 inline Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
716 typedef Iter<TContainer, TSpec> TIter;
718 TContainer &cont = container(iter);
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/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/basic/
H A Diterator_base.h96 IsSameType<typename RemoveConst_<TContainer>::Type, TContainer>::VALUE,
97 TContainer const,
167 Value<TContainer>
173 Value<TContainer>
183 GetValue<TContainer>
189 GetValue<TContainer>
199 Reference<TContainer>
205 Reference<TContainer>
229 typedef TContainer Type;
235 typedef TContainer Type;
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H A Diterator_adapt_std.h94 template <typename TContainer>
180 template <typename TContainer>
187 template <typename TContainer>
199 template <typename TContainer>
206 template <typename TContainer>
218 template <typename TContainer>
225 template <typename TContainer>
229 template <typename TContainer>
237 template <typename TContainer>
270 template <typename TContainer>
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H A Diterator_adaptor.h89 class Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
92 typename Pointer_<TContainer>::Type data_container;
272 inline SEQAN_HOST_DEVICE TContainer &
275 return _referenceCast<TContainer &>(me.data_container);
279 inline SEQAN_HOST_DEVICE TContainer &
604 inline Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
614 inline Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
623 inline Iter<TContainer, AdaptorIterator<TIterator, TSpec> >
760 typedef Iter<TContainer, TSpec> TIter;
762 TContainer &cont = container(iter);
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H A Diterator_position.h80 template <typename TContainer>
143 template <typename TContainer>
144 struct Size<Iter<TContainer, PositionIterator> > : Size<TContainer> {};
146 template <typename TContainer>
147 struct Position<Iter<TContainer, PositionIterator> > : Position<TContainer> {};
149 template <typename TContainer>
150 struct Reference<Iter<TContainer, PositionIterator> > : Reference<TContainer> {};
152 template <typename TContainer>
153 struct Difference<Iter<TContainer, PositionIterator> > : Difference<TContainer> {};
163 template <typename TContainer>
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/sequence/
H A Dcontainer_view.h181 template <typename TContainer, typename TSpec>
183 public ContainerView<TContainer, TSpec>
231 template <typename TContainer, typename TSpec>
234 template <typename TContainer, typename TSpec>
251 template <typename TContainer, typename TSpec>
254 typedef TContainer Type;
261 template <typename TContainer, typename TSpec>
268 template <typename TContainer, typename TSpec>
274 template <typename TContainer, typename TSpec>
304 public Iterator<TContainer, Standard> {};
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H A Dadapt_stl_container.h374 _iterStl(TContainer & me,
615 resize(TContainer && me,
629 resize(TContainer && me,
645 clear(TContainer && me)
790 assign(TContainer && me,
800 assign(TContainer && me,
809 assign(TContainer && me,
826 insert(TContainer && me,
1119 erase(TContainer && me,
1147 erase(TContainer && me,
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/dports/biology/seqan/seqan-library-2.4.0/include/seqan/sequence/
H A Dcontainer_view.h181 template <typename TContainer, typename TSpec>
183 public ContainerView<TContainer, TSpec>
231 template <typename TContainer, typename TSpec>
234 template <typename TContainer, typename TSpec>
251 template <typename TContainer, typename TSpec>
254 typedef TContainer Type;
261 template <typename TContainer, typename TSpec>
268 template <typename TContainer, typename TSpec>
274 template <typename TContainer, typename TSpec>
304 public Iterator<TContainer, Standard> {};
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/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/sequence/
H A Dcontainer_view.h133 template <typename TContainer, typename TSpec>
135 public ContainerView<TContainer, TSpec>
183 template <typename TContainer, typename TSpec>
186 template <typename TContainer, typename TSpec>
203 template <typename TContainer, typename TSpec>
206 typedef TContainer Type;
213 template <typename TContainer, typename TSpec>
220 template <typename TContainer, typename TSpec>
226 template <typename TContainer, typename TSpec>
256 public Iterator<TContainer, Standard> {};
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/seeds/
H A Dbasic_iter_indirect.h53 template <typename TContainer, typename TWrappedIter>
54 class Iter<TContainer, Indirect<TWrappedIter> >
73 template <typename TContainer, typename TWrappedIter>
83 template <typename TContainer, typename TWrappedIter>
85 operator==(Iter<TContainer, Indirect<TWrappedIter> > const & a, Iter<TContainer, Indirect<TWrappedI…
93 operator!=(Iter<TContainer, Indirect<TWrappedIter> > const & a, Iter<TContainer, Indirect<TWrappedI…
99 Iter<TContainer, Indirect<TWrappedIter> >
108 inline Iter<TContainer, Indirect<TWrappedIter> > &
117 inline Iter<TContainer, Indirect<TWrappedIter> >
128 inline Iter<TContainer, Indirect<TWrappedIter> > &
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/dports/biology/seqan/seqan-library-2.4.0/include/seqan/seeds/
H A Dbasic_iter_indirect.h53 template <typename TContainer, typename TWrappedIter>
54 class Iter<TContainer, Indirect<TWrappedIter> >
73 template <typename TContainer, typename TWrappedIter>
83 template <typename TContainer, typename TWrappedIter>
85 operator==(Iter<TContainer, Indirect<TWrappedIter> > const & a, Iter<TContainer, Indirect<TWrappedI…
93 operator!=(Iter<TContainer, Indirect<TWrappedIter> > const & a, Iter<TContainer, Indirect<TWrappedI…
99 Iter<TContainer, Indirect<TWrappedIter> >
108 inline Iter<TContainer, Indirect<TWrappedIter> > &
117 inline Iter<TContainer, Indirect<TWrappedIter> >
128 inline Iter<TContainer, Indirect<TWrappedIter> > &
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/parallel/
H A Dparallel_algorithms.h585 template <typename TContainer>
605 template <typename TContainer>
623 template <typename TContainer>
639 template <typename TContainer>
780 template <typename TContainer>
782 maxElement(TContainer const & c) in maxElement()
798 template <typename TContainer>
800 minElement(TContainer const & c) in minElement()
815 template <typename TContainer>
816 inline void sort(TContainer && c) in sort()
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/dports/biology/seqan/seqan-library-2.4.0/include/seqan/parallel/
H A Dparallel_algorithms.h585 template <typename TContainer>
605 template <typename TContainer>
623 template <typename TContainer>
639 template <typename TContainer>
780 template <typename TContainer>
782 maxElement(TContainer const & c) in maxElement()
798 template <typename TContainer>
800 minElement(TContainer const & c) in minElement()
815 template <typename TContainer>
816 inline void sort(TContainer && c) in sort()
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/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/seeds/
H A Dbasic_iter_indirect.h53 template <typename TContainer, typename TWrappedIter>
54 class Iter<TContainer, Indirect<TWrappedIter> >
73 template <typename TContainer, typename TWrappedIter>
83 template <typename TContainer, typename TWrappedIter>
85 operator==(Iter<TContainer, Indirect<TWrappedIter> > const & a, Iter<TContainer, Indirect<TWrappedI…
94 operator!=(Iter<TContainer, Indirect<TWrappedIter> > const & a, Iter<TContainer, Indirect<TWrappedI…
101 Iter<TContainer, Indirect<TWrappedIter> >
111 inline Iter<TContainer, Indirect<TWrappedIter> > &
121 inline Iter<TContainer, Indirect<TWrappedIter> >
133 inline Iter<TContainer, Indirect<TWrappedIter> > &
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