Searched refs:TMorJTT (Results 1 – 14 of 14) sorted by relevance
| /dports/biology/mafft/mafft-7.267-without-extensions/core/ |
| H A D | mafft-profile.c | 62 TMorJTT = JTT; in arguments()
148 TMorJTT = JTT; in arguments()
155 TMorJTT = TM; in arguments()
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| H A D | rnatest.c | 108 TMorJTT = JTT; in arguments()
115 TMorJTT = TM; in arguments()
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| H A D | defs.c | 65 int TMorJTT; variable
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| H A D | dndpre.c | 182 TMorJTT = JTT; in arguments()
189 TMorJTT = TM; in arguments()
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| H A D | mltaln.h | 108 extern int TMorJTT;
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| H A D | dvtditr.c | 96 TMorJTT = JTT; in arguments()
167 TMorJTT = JTT; in arguments()
174 TMorJTT = TM; in arguments()
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| H A D | pairash.c | 844 TMorJTT = JTT; in arguments()
851 TMorJTT = TM; in arguments()
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| H A D | constants.c | 1042 …sprintf( modelname, "%s %dPAM, %4.2f, %4.2f, %s", (TMorJTT==TM)?"Transmembrane":"JTT", pamN, -(dou… in constants()
1044 JTTmtx( rsr, freq, amino, amino_grp, (int)(TMorJTT==TM) ); in constants()
1070 …reporterr( "generating %dPAM %s scoring matrix for amino acids ... ", pamN, (TMorJTT==TM)?"T… in constants()
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| H A D | makedirectionlist.c | 100 TMorJTT = JTT; in arguments()
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| H A D | tbfast.c | 123 TMorJTT = JTT; in arguments()
197 TMorJTT = JTT; in arguments()
204 TMorJTT = TM; in arguments()
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| H A D | disttbfast.c | 161 TMorJTT = JTT; in arguments()
229 TMorJTT = JTT; in arguments()
236 TMorJTT = TM; in arguments()
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| H A D | splittbfast.c | 586 TMorJTT = JTT; in arguments()
646 TMorJTT = JTT; in arguments()
653 TMorJTT = TM; in arguments()
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| H A D | addsingle.c | 852 TMorJTT = JTT; in arguments()
923 TMorJTT = JTT; in arguments()
930 TMorJTT = TM; in arguments()
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| H A D | pairlocalalign.c | 1684 TMorJTT = JTT; in arguments()
1691 TMorJTT = TM; in arguments()
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