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Searched refs:TSeedIterator (Results 1 – 7 of 7) sorted by relevance

/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/seeds/
H A Dseeds_seed_set_unordered.h321 typedef typename TSet::iterator TSeedIterator;
324 TSeedIterator it;
H A Dbanded_chain_alignment_impl.h108 typedef typename Iterator<TSeedSet const>::Type TSeedIterator; in _isLastSeed() typedef
109 TSeedIterator itEnd = end(seedSet, Standard()); in _isLastSeed()
/dports/biology/seqan/seqan-library-2.4.0/include/seqan/seeds/
H A Dseeds_seed_set_unordered.h321 typedef typename TSet::iterator TSeedIterator;
324 TSeedIterator it;
H A Dbanded_chain_alignment_impl.h108 typedef typename Iterator<TSeedSet const>::Type TSeedIterator; in _isLastSeed() typedef
109 TSeedIterator itEnd = end(seedSet, Standard()); in _isLastSeed()
/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/seeds/
H A Dseeds_seed_set_unordered.h322 typedef typename TSet::iterator TSeedIterator;
325 TSeedIterator it;
H A Dbanded_chain_alignment_impl.h92 typedef typename Iterator<TSeedSet const>::Type TSeedIterator; in _isLastSeed() typedef
93 TSeedIterator itEnd = end(seedSet, Standard()); in _isLastSeed()
/dports/biology/seqan1/seqan-1.3.1/seqan/seeds2/
H A Dalign_chain_banded.h617 typedef typename Iterator<TSeedChain, Standard>::Type TSeedIterator;
643 for (TSeedIterator it = begin(seedChain); it != end(seedChain); ++it) {
675 for (TSeedIterator it = begin(seedChain) + 1; it != end(seedChain); ++it) {