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Searched refs:TSwiftFinderR (Results 1 – 9 of 9) sorted by relevance

/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/razers/
H A Drazers_matepairs.h355 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR;
394 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1);
H A Drazers_spliced.h1755 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR; in mapSplicedReads() typedef
1791 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1); in mapSplicedReads()
/dports/biology/seqan1/seqan-1.3.1/apps/razers2/
H A Drazers_matepairs.h391 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR;
445 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1);
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/splazers/
H A Drazers_matepairs.h632 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR;
671 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1);
H A Drazers_spliced.h2363 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR; in mapSplicedReads() typedef
2420 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1); in mapSplicedReads()
/dports/biology/seqan1/seqan-1.3.1/apps/razers/
H A Drazers_matepairs.h665 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR;
704 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1);
H A Drazers_spliced.h1753 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR; in mapSplicedReads() typedef
1789 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1); in mapSplicedReads()
/dports/biology/seqan1/seqan-1.3.1/apps/splazers/
H A Drazers_matepairs.h644 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR;
683 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1);
H A Drazers_spliced.h1816 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR; in mapSplicedReads() typedef
1852 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1); in mapSplicedReads()