Searched refs:TSwiftFinderR (Results 1 – 9 of 9) sorted by relevance
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/razers/ |
H A D | razers_matepairs.h | 355 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR; 394 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1);
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H A D | razers_spliced.h | 1755 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR; in mapSplicedReads() typedef 1791 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1); in mapSplicedReads()
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/dports/biology/seqan1/seqan-1.3.1/apps/razers2/ |
H A D | razers_matepairs.h | 391 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR; 445 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1);
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/splazers/ |
H A D | razers_matepairs.h | 632 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR; 671 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1);
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H A D | razers_spliced.h | 2363 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR; in mapSplicedReads() typedef 2420 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1); in mapSplicedReads()
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/dports/biology/seqan1/seqan-1.3.1/apps/razers/ |
H A D | razers_matepairs.h | 665 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR; 704 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1);
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H A D | razers_spliced.h | 1753 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR; in mapSplicedReads() typedef 1789 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1); in mapSplicedReads()
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/dports/biology/seqan1/seqan-1.3.1/apps/splazers/ |
H A D | razers_matepairs.h | 644 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR; 683 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1);
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H A D | razers_spliced.h | 1816 typedef Finder<TGenomeInf, Swift<TSwiftSpec> > TSwiftFinderR; in mapSplicedReads() typedef 1852 TSwiftFinderR swiftFinderR(genomeInf, options.repeatLength, 1); in mapSplicedReads()
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