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Searched refs:_horizontalBandShiftBeginPoint (Results 1 – 3 of 3) sorted by relevance

/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/seeds/
H A Dbanded_chain_alignment_impl.h183 inline typename Size<TSeed>::Type _horizontalBandShiftBeginPoint(TSeed const & seed) in _horizontalBandShiftBeginPoint() function
745 TSeedSize horizontalBandShift = _horizontalBandShiftBeginPoint(seed); in _initializeBandedChain()
904 …nt gridEnd(beginPositionH(currentSeed) + 1 + bandExtension + _horizontalBandShiftBeginPoint(curren… in _computeGapArea()
968 TPosition horizontalBandShift = _horizontalBandShiftBeginPoint(currentSeed); in _computeAnchorArea()
1039 TPosition horizontalBandShift = _horizontalBandShiftBeginPoint(currentSeed); in _finishBandedChain()
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/seeds/
H A Dbanded_chain_alignment_impl.h199 inline typename Size<TSeed>::Type _horizontalBandShiftBeginPoint(TSeed const & seed) in _horizontalBandShiftBeginPoint() function
833 TSeedSize horizontalBandShift = _horizontalBandShiftBeginPoint(seed); in _initializeBandedChain()
994 …nt gridEnd(beginPositionH(currentSeed) + 1 + bandExtension + _horizontalBandShiftBeginPoint(curren… in _computeGapArea()
1061 TPosition horizontalBandShift = _horizontalBandShiftBeginPoint(currentSeed); in _computeAnchorArea()
1133 TPosition horizontalBandShift = _horizontalBandShiftBeginPoint(currentSeed); in _finishBandedChain()
/dports/biology/seqan/seqan-library-2.4.0/include/seqan/seeds/
H A Dbanded_chain_alignment_impl.h199 inline typename Size<TSeed>::Type _horizontalBandShiftBeginPoint(TSeed const & seed) in _horizontalBandShiftBeginPoint() function
833 TSeedSize horizontalBandShift = _horizontalBandShiftBeginPoint(seed); in _initializeBandedChain()
994 …nt gridEnd(beginPositionH(currentSeed) + 1 + bandExtension + _horizontalBandShiftBeginPoint(curren… in _computeGapArea()
1061 TPosition horizontalBandShift = _horizontalBandShiftBeginPoint(currentSeed); in _computeAnchorArea()
1133 TPosition horizontalBandShift = _horizontalBandShiftBeginPoint(currentSeed); in _finishBandedChain()