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Searched refs:_journalStringPtr (Results 1 – 9 of 9) sorted by relevance

/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/sequence_journaled/
H A Dsequence_journaled_iterator_fast.h63 TJournaledString * _journalStringPtr; variable
73 _journalStringPtr(), _journalEntriesIterator(), _segmentBegin(), _segmentEnd(), in Iter()
78 : _journalStringPtr(other._journalStringPtr), in Iter()
88 : _journalStringPtr(other._journalStringPtr), in Iter()
101 _journalStringPtr = other._journalStringPtr;
114 _journalStringPtr = other._journalStringPtr;
141 …iterator._journalEntriesIterator = end(iterator._journalStringPtr->_journalEntries, Standard()) - … in _initJournaledStringIteratorEnd()
373 …ournalEntriesIterator).virtualPosition + _localEntryPosition(it2), length(*it1._journalStringPtr));
374 …return length(*it1._journalStringPtr) - (value(it2._journalEntriesIterator).virtualPosition + _loc…
378 …urnalEntriesIterator).virtualPosition + _localEntryPosition(it1)), length(*it1._journalStringPtr));
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H A Dsequence_journaled_iterator.h66 TJournaledString * _journalStringPtr; variable
87 : _journalStringPtr(other._journalStringPtr), in Iter()
100 : _journalStringPtr(other._journalStringPtr), in Iter()
124 _journalStringPtr = other._journalStringPtr;
140 _journalStringPtr = other._journalStringPtr;
356 result._journalStringPtr = &journalString;
368 result._journalStringPtr = &journalString;
384 result._journalStringPtr = &journalString;
780 iter._journalStringPtr = &container;
791 return *iter._journalStringPtr;
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/sequence_journaled/
H A Dsequence_journaled_iterator_fast.h63 TJournaledString * _journalStringPtr; variable
73 _journalStringPtr(), _journalEntriesIterator(), _segmentBegin(), _segmentEnd(), in Iter()
80 : _journalStringPtr(other._journalStringPtr), in Iter()
94 _journalStringPtr = other._journalStringPtr; in SEQAN_FUNC_ENABLE_IF()
120 …iterator._journalEntriesIterator = end(iterator._journalStringPtr->_journalEntries, Standard()) - … in _initJournaledStringIteratorEnd()
142 …iterator._segmentBegin = begin(host(*iterator._journalStringPtr), Standard()) + value(iterator._jo… in _updateSegmentIterators()
166 …iterator._segmentBegin = begin(host(*iterator._journalStringPtr), Standard()) + value(iterator._jo… in _updateSegmentIteratorsLeft()
352 …ournalEntriesIterator).virtualPosition + _localEntryPosition(it2), length(*it1._journalStringPtr));
353 …return length(*it1._journalStringPtr) - (value(it2._journalEntriesIterator).virtualPosition + _loc…
357 …urnalEntriesIterator).virtualPosition + _localEntryPosition(it1)), length(*it1._journalStringPtr));
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H A Dsequence_journaled_iterator.h66 TJournaledString * _journalStringPtr; variable
87 : _journalStringPtr(other._journalStringPtr), in Iter()
99 : _journalStringPtr(other._journalStringPtr), in Iter()
121 _journalStringPtr = other._journalStringPtr;
137 _journalStringPtr = other._journalStringPtr;
356 result._journalStringPtr = &journalString;
368 result._journalStringPtr = &journalString;
384 result._journalStringPtr = &journalString;
770 iter._journalStringPtr = &container;
781 return *iter._journalStringPtr;
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/dports/biology/seqan/seqan-library-2.4.0/include/seqan/sequence_journaled/
H A Dsequence_journaled_iterator_fast.h63 TJournaledString * _journalStringPtr; variable
73 _journalStringPtr(), _journalEntriesIterator(), _segmentBegin(), _segmentEnd(), in Iter()
80 : _journalStringPtr(other._journalStringPtr), in Iter()
94 _journalStringPtr = other._journalStringPtr; in SEQAN_FUNC_ENABLE_IF()
120 …iterator._journalEntriesIterator = end(iterator._journalStringPtr->_journalEntries, Standard()) - … in _initJournaledStringIteratorEnd()
142 …iterator._segmentBegin = begin(host(*iterator._journalStringPtr), Standard()) + value(iterator._jo… in _updateSegmentIterators()
166 …iterator._segmentBegin = begin(host(*iterator._journalStringPtr), Standard()) + value(iterator._jo… in _updateSegmentIteratorsLeft()
352 …ournalEntriesIterator).virtualPosition + _localEntryPosition(it2), length(*it1._journalStringPtr));
353 …return length(*it1._journalStringPtr) - (value(it2._journalEntriesIterator).virtualPosition + _loc…
357 …urnalEntriesIterator).virtualPosition + _localEntryPosition(it1)), length(*it1._journalStringPtr));
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H A Dsequence_journaled_iterator.h66 TJournaledString * _journalStringPtr; variable
87 : _journalStringPtr(other._journalStringPtr), in Iter()
99 : _journalStringPtr(other._journalStringPtr), in Iter()
121 _journalStringPtr = other._journalStringPtr;
137 _journalStringPtr = other._journalStringPtr;
356 result._journalStringPtr = &journalString;
368 result._journalStringPtr = &journalString;
384 result._journalStringPtr = &journalString;
770 iter._journalStringPtr = &container;
781 return *iter._journalStringPtr;
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/dports/biology/seqan1/seqan-1.3.1/seqan/sequence_journaled/
H A Dsequence_journaled_iterator.h64 TJournaledString * _journalStringPtr; variable
78 Iter() : _journalStringPtr(0) { SEQAN_CHECKPOINT; } in Iter()
81 : _journalStringPtr(other._journalStringPtr), in Iter()
94 : _journalStringPtr(other._journalStringPtr), in Iter()
213 iterator._journalStringPtr = &journalString;
226 iterator._journalStringPtr = &journalString;
245 …iterator._hostSegmentBegin = begin(host(*iterator._journalStringPtr), Standard()) + value(iterator…
250 …iterator._insertionBufferSegmentBegin = begin(iterator._journalStringPtr->_insertionBuffer, Standa…
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/journaled_string_tree/
H A Djournaled_string_tree_traverser_util.h358 TJournalEntries & journalEntries = _journalEntries(*resultIt._journalStringPtr);
/dports/biology/seqan/seqan-library-2.4.0/include/seqan/journaled_string_tree/
H A Djournaled_string_tree_traverser_util.h358 TJournalEntries & journalEntries = _journalEntries(*resultIt._journalStringPtr);