| /dports/biology/seqan1/seqan-1.3.1/seqan/refinement/ |
| H A D | graph_algorithm_refine_exact.h | 281 _makeRefinedGraphEdges(TAlignmentString & alis, in _makeRefinedGraphEdges() function
377 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
415 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
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| H A D | graph_algorithm_refine_exact_iterative.h | 297 _makeRefinedGraphEdges(TAlignmentString & alis, in _makeRefinedGraphEdges() function
393 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
431 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
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| H A D | graph_algorithm_refine_inexact.h | 148 _makeRefinedGraphEdges(TAlignmentString & alis, in _makeRefinedGraphEdges() function
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| H A D | refinement_generated_forwards.h | 262 …ngSet,typename TSeqMap, typename TScore,typename TAliGraph> void _makeRefinedGraphEdges(TAlignment…
263 …, typename TPropertyMap,typename TScore,typename TAliGraph> void _makeRefinedGraphEdges(TAlignment…
264 …, typename TPropertyMap,typename TScore,typename TAliGraph> void _makeRefinedGraphEdges(TAlignment…
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| /dports/biology/seqan/seqan-library-2.4.0/include/seqan/graph_align/ |
| H A D | graph_algorithm_refine_exact.h | 275 _makeRefinedGraphEdges(TAlignmentString & alis, in _makeRefinedGraphEdges() function
369 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
406 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
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| H A D | graph_algorithm_refine_exact_iterative.h | 299 _makeRefinedGraphEdges(TAlignmentString & alis, in _makeRefinedGraphEdges() function
422 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
459 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
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| H A D | graph_algorithm_refine_inexact.h | 154 _makeRefinedGraphEdges(TAlignmentString & alis, in _makeRefinedGraphEdges() function
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/graph_align/ |
| H A D | graph_algorithm_refine_exact.h | 275 _makeRefinedGraphEdges(TAlignmentString & alis, in _makeRefinedGraphEdges() function
369 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
406 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
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| H A D | graph_algorithm_refine_exact_iterative.h | 299 _makeRefinedGraphEdges(TAlignmentString & alis, in _makeRefinedGraphEdges() function
422 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
459 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
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| H A D | graph_algorithm_refine_inexact.h | 154 _makeRefinedGraphEdges(TAlignmentString & alis, in _makeRefinedGraphEdges() function
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| /dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/graph_align/ |
| H A D | graph_algorithm_refine_exact.h | 280 _makeRefinedGraphEdges(TAlignmentString & alis, in _makeRefinedGraphEdges() function
376 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
414 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
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| H A D | graph_algorithm_refine_exact_iterative.h | 303 _makeRefinedGraphEdges(TAlignmentString & alis, in _makeRefinedGraphEdges() function
428 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
466 _makeRefinedGraphEdges(alis,pm,seqs,seq_map,score_type,ali_g,tag); in _makeAlignmentGraphFromRefinedSegments()
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| H A D | graph_algorithm_refine_inexact.h | 158 _makeRefinedGraphEdges(TAlignmentString & alis, in _makeRefinedGraphEdges() function
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