Searched refs:_substitutionMatrix (Results 1 – 3 of 3) sorted by relevance
| /dports/biology/ugene/ugene-40.1/src/plugins/smith_waterman/src/ |
| H A D | SmithWatermanAlgorithm.cpp | 96 void SmithWatermanAlgorithm::setValues(const SMatrix &_substitutionMatrix, in setValues() argument
103 substitutionMatrix = _substitutionMatrix; in setValues()
112 void SmithWatermanAlgorithm::launch(const SMatrix &_substitutionMatrix, in launch() argument
119 …setValues(_substitutionMatrix, _patternSeq, _searchSeq, _gapOpen, _gapExtension, _minScore, _resul… in launch()
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| H A D | SmithWatermanAlgorithm.h | 55 void setValues(const SMatrix &_substitutionMatrix,
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| H A D | SmithWatermanAlgorithmSSE2.cpp | 101 void SmithWatermanAlgorithmSSE2::launch(const SMatrix &_substitutionMatrix, const QByteArray &_patt… in launch() argument
102 …setValues(_substitutionMatrix, _patternSeq, _searchSeq, _gapOpen, _gapExtension, _minScore, _resul… in launch()
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