/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/util/bitset/ |
H A D | bmsse_util.h | 129 __m128i accA, accB, accC, accD; in sse2_and_block() local 151 accD = _mm_or_si128(accD, m1D); in sse2_and_block() 180 __m128i accA, accB, accC, accD; in sse2_and_arr_unal() local 185 accD = _mm_setzero_si128(); in sse2_and_arr_unal() 211 accD = _mm_or_si128(accD, m1D); in sse2_and_arr_unal() 233 __m128i accA, accB, accC, accD; in sse2_and_block() local 238 accD = _mm_setzero_si128(); in sse2_and_block() 264 accD = _mm_or_si128(accD, m1D); in sse2_and_block() 588 accD = _mm_or_si128(accD, m1D); in sse2_xor_block() 636 accD = _mm_or_si128(accD, m1D); in sse2_xor_block_2way() [all …]
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H A D | bmavx512.h | 449 __m512i accA, accB, accC, accD; in avx512_and_block() local 471 accD = _mm512_or_si512(accD, m1D); in avx512_and_block() 547 __m256i accA, accB, accC, accD; in avx2_and_arr_unal() local 552 accD = _mm256_setzero_si256(); in avx2_and_arr_unal() 578 accD = _mm256_or_si256(accD, m1D); in avx2_and_arr_unal() 869 __m512i accA, accB, accC, accD; in avx512_xor_block() local 891 accD = _mm512_or_si512(accD, m1D); in avx512_xor_block() 916 __m512i accA, accB, accC, accD; in avx512_xor_block_2way() local 938 accD = _mm512_or_si512(accD, m1D); in avx512_xor_block_2way() 965 __m512i accA, accB, accC, accD; in avx512_sub_block() local [all …]
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H A D | bmavx2.h | 500 __m256i accA, accB, accC, accD; in avx2_and_block() local 522 accD = _mm256_or_si256(accD, m1D); in avx2_and_block() 676 __m256i accA, accB, accC, accD; in avx2_and_arr_unal() local 681 accD = _mm256_setzero_si256(); in avx2_and_arr_unal() 707 accD = _mm256_or_si256(accD, m1D); in avx2_and_arr_unal() 1006 __m256i accA, accB, accC, accD; in avx2_xor_block() local 1028 accD = _mm256_or_si256(accD, m1D); in avx2_xor_block() 1053 __m256i accA, accB, accC, accD; in avx2_xor_block_2way() local 1075 accD = _mm256_or_si256(accD, m1D); in avx2_xor_block_2way() 1102 __m256i accA, accB, accC, accD; in avx2_sub_block() local [all …]
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H A D | bmsse4.h | 241 __m128i accA, accB, accC, accD; in sse4_and_block() local 246 accA = accB = accC = accD = _mm_setzero_si128(); in sse4_and_block() 263 accD = _mm_or_si128(accD, m1D); in sse4_and_block() 269 accC = _mm_or_si128(accC, accD); // C = C | D in sse4_and_block()
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/util/bitset/ |
H A D | bmsse_util.h | 129 __m128i accA, accB, accC, accD; in sse2_and_block() local 151 accD = _mm_or_si128(accD, m1D); in sse2_and_block() 180 __m128i accA, accB, accC, accD; in sse2_and_arr_unal() local 185 accD = _mm_setzero_si128(); in sse2_and_arr_unal() 211 accD = _mm_or_si128(accD, m1D); in sse2_and_arr_unal() 233 __m128i accA, accB, accC, accD; in sse2_and_block() local 238 accD = _mm_setzero_si128(); in sse2_and_block() 264 accD = _mm_or_si128(accD, m1D); in sse2_and_block() 588 accD = _mm_or_si128(accD, m1D); in sse2_xor_block() 636 accD = _mm_or_si128(accD, m1D); in sse2_xor_block_2way() [all …]
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H A D | bmavx512.h | 449 __m512i accA, accB, accC, accD; in avx512_and_block() local 471 accD = _mm512_or_si512(accD, m1D); in avx512_and_block() 547 __m256i accA, accB, accC, accD; in avx2_and_arr_unal() local 552 accD = _mm256_setzero_si256(); in avx2_and_arr_unal() 578 accD = _mm256_or_si256(accD, m1D); in avx2_and_arr_unal() 869 __m512i accA, accB, accC, accD; in avx512_xor_block() local 891 accD = _mm512_or_si512(accD, m1D); in avx512_xor_block() 916 __m512i accA, accB, accC, accD; in avx512_xor_block_2way() local 938 accD = _mm512_or_si512(accD, m1D); in avx512_xor_block_2way() 965 __m512i accA, accB, accC, accD; in avx512_sub_block() local [all …]
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H A D | bmavx2.h | 500 __m256i accA, accB, accC, accD; in avx2_and_block() local 522 accD = _mm256_or_si256(accD, m1D); in avx2_and_block() 676 __m256i accA, accB, accC, accD; in avx2_and_arr_unal() local 681 accD = _mm256_setzero_si256(); in avx2_and_arr_unal() 707 accD = _mm256_or_si256(accD, m1D); in avx2_and_arr_unal() 1006 __m256i accA, accB, accC, accD; in avx2_xor_block() local 1028 accD = _mm256_or_si256(accD, m1D); in avx2_xor_block() 1053 __m256i accA, accB, accC, accD; in avx2_xor_block_2way() local 1075 accD = _mm256_or_si256(accD, m1D); in avx2_xor_block_2way() 1102 __m256i accA, accB, accC, accD; in avx2_sub_block() local [all …]
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H A D | bmsse4.h | 241 __m128i accA, accB, accC, accD; in sse4_and_block() local 246 accA = accB = accC = accD = _mm_setzero_si128(); in sse4_and_block() 263 accD = _mm_or_si128(accD, m1D); in sse4_and_block() 269 accC = _mm_or_si128(accC, accD); // C = C | D in sse4_and_block()
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/dports/databases/arrow/apache-arrow-6.0.1/cpp/src/arrow/compute/exec/ |
H A D | key_hash_avx2.cc | 196 __m256i accD = in hash_varlen_avx2() local 201 __m256i r2 = _mm256_unpacklo_epi32(accC, accD); in hash_varlen_avx2() 202 __m256i r3 = _mm256_unpackhi_epi32(accC, accD); in hash_varlen_avx2() 206 accD = _mm256_unpackhi_epi64(r1, r3); in hash_varlen_avx2() 214 accD = _mm256_or_si256(_mm256_slli_epi32(accD, 18), _mm256_srli_epi32(accD, 32 - 18)); in hash_varlen_avx2() 215 accA = _mm256_add_epi32(_mm256_add_epi32(accA, accB), _mm256_add_epi32(accC, accD)); in hash_varlen_avx2()
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/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/spark/pathseq/ |
H A D | PSBuildReferenceTaxonomyUtilsTest.java | 191 final String accD = "ref|acc_D|taxid|5"; in testBuildReferenceNameToTaxMap() local 200 taxPropertiesB.addAccession(accD, 100); in testBuildReferenceNameToTaxMap() 212 Assert.assertTrue(result.containsKey(accD)); in testBuildReferenceNameToTaxMap() 213 Assert.assertEquals(result.get(accD).intValue(), 5); in testBuildReferenceNameToTaxMap()
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/dports/devel/tinygo/tinygo-0.14.1/llvm-project/mlir/lib/Conversion/VectorToLLVM/ |
H A D | ConvertVectorToLLVM.cpp | 669 Value aD = nullptr, accD = nullptr; in matchAndRewrite() local 674 accD = rewriter.create<LLVM::ExtractValueOp>( in matchAndRewrite() 678 accD ? rewriter.create<LLVM::FMulAddOp>(loc, vRHS, aD, b, accD) in matchAndRewrite()
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/writers/unit_test/gtfwriter_test_cases/ |
H A D | rw-836-3.entry.gtf | 190 AP000423.1 DDBJ gene 57075 58541 . + . gene_id "accD"; transcript_id ""; gbkey "Gene"; gene "accD";… 191 …3.1 DDBJ CDS 57075 58538 . + 0 gene_id "accD"; transcript_id "unassigned_transcript_50"; gbkey "CD… 192 … start_codon 57075 57077 . + 0 gene_id "accD"; transcript_id "unassigned_transcript_50"; gbkey "CD… 193 …J stop_codon 58539 58541 . + 0 gene_id "accD"; transcript_id "unassigned_transcript_50"; gbkey "CD…
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H A D | rw-836-3.entry.asn | 2534 locus "accD"
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/dports/astro/gpsd/gpsd-3.20/ |
H A D | driver_ubx.c | 627 double accN, accE, accD; in ubx_msg_nav_relposned() local 650 accD = 1e-4 * getles32(buf, 32); in ubx_msg_nav_relposned() 664 accN, accE, accD); in ubx_msg_nav_relposned()
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/dports/biology/py-biopython/biopython-1.79/Tests/GenBank/ |
H A D | NC_000932.gb | 830 /gene="accD" 834 /gene="accD"
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/dports/biology/gatk/gatk-4.2.0.0/src/test/resources/org/broadinstitute/hellbender/tools/walkers/rnaseq/GeneExpressionEvaluation/ |
H A D | e_coli_expected.overlap.equal.map.equal.tsv | 4864 accD NC_000913.3 2433012 2433926 - sense 0.0 4865 accD NC_000913.3 2433012 2433926 - antisense 0.0
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H A D | e_coli_expected.overlap.equal.map.ignore.tsv | 4864 accD NC_000913.3 2433012 2433926 - sense 0.0 4865 accD NC_000913.3 2433012 2433926 - antisense 0.0
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H A D | e_coli_expected.overlap.proportional.map.equal.tsv | 4864 accD NC_000913.3 2433012 2433926 - sense 0.0 4865 accD NC_000913.3 2433012 2433926 - antisense 0.0
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H A D | e_coli_expected.overlap.proportional.map.ignore.tsv | 4864 accD NC_000913.3 2433012 2433926 - sense 0.0 4865 accD NC_000913.3 2433012 2433926 - antisense 0.0
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/dports/biology/mmseqs2/MMseqs2-13-45111/examples/ |
H A D | DB.fasta | 989 …rboxylase carboxyltransferase beta subunit OS=Oryza sativa subsp. indica GN=accD PE=4 SV=1 Split=0 1585 >tr|H6CST6|H6CST6_ORYRU AccD OS=Oryza rufipogon GN=accD PE=4 SV=1 Split=0 2213 … A carboxylase carboxyl transferase subunit beta OS=Vibrio renipiscarius GN=accD PE=3 SV=1 Split=0 7659 …e subunit beta OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=accD PE=3 SV=1 Split=0 9295 …ase carboxyl transferase subunit beta OS=Vibrio proteolyticus NBRC 13287 GN=accD PE=3 SV=1 Split=0 25913 …carboxylase carboxyl transferase subunit beta OS=Collinsella sp. CAG:289 GN=accD PE=3 SV=1 Split=0 27299 …yl transferase subunit beta-like protein OS=Oryza sativa subsp. japonica GN=accD PE=5 SV=1 Split=0 33169 >tr|E9KIW6|E9KIW6_9ORYZ AccD OS=Oryza meridionalis GN=accD PE=4 SV=1 Split=0 34009 …enzyme A carboxylase carboxyl transferase subunit beta OS=Vibrio harveyi GN=accD PE=3 SV=1 Split=0
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